Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap54Q8C6S9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap54Q8C6S9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.18■□□□□ 0.5
Cfap54Q8C6S9 Gm5417-201ENSMUST00000079706 384 ntBASIC18.18■□□□□ 0.5
Cfap54Q8C6S9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Cfap54Q8C6S9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap54Q8C6S9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap54Q8C6S9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap54Q8C6S9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap54Q8C6S9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap54Q8C6S9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap54Q8C6S9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap54Q8C6S9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap54Q8C6S9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap54Q8C6S9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfap54Q8C6S9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfap54Q8C6S9 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.16■□□□□ 0.5
Cfap54Q8C6S9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.16■□□□□ 0.5
Cfap54Q8C6S9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfap54Q8C6S9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfap54Q8C6S9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cfap54Q8C6S9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfap54Q8C6S9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cfap54Q8C6S9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfap54Q8C6S9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cfap54Q8C6S9 Gm13559-201ENSMUST00000120476 863 ntBASIC18.16■□□□□ 0.5
Cfap54Q8C6S9 Gm44549-201ENSMUST00000208351 577 ntBASIC18.16■□□□□ 0.5
Cfap54Q8C6S9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cfap54Q8C6S9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cfap54Q8C6S9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cfap54Q8C6S9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cfap54Q8C6S9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.15■□□□□ 0.5
Cfap54Q8C6S9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.15■□□□□ 0.5
Cfap54Q8C6S9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cfap54Q8C6S9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cfap54Q8C6S9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cfap54Q8C6S9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cfap54Q8C6S9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cfap54Q8C6S9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cfap54Q8C6S9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cfap54Q8C6S9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
Cfap54Q8C6S9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cfap54Q8C6S9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap54Q8C6S9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap54Q8C6S9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap54Q8C6S9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap54Q8C6S9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap54Q8C6S9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap54Q8C6S9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap54Q8C6S9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cfap54Q8C6S9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap54Q8C6S9 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.14■□□□□ 0.49
Cfap54Q8C6S9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap54Q8C6S9 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap54Q8C6S9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap54Q8C6S9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap54Q8C6S9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap54Q8C6S9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap54Q8C6S9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap54Q8C6S9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Cfap54Q8C6S9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap54Q8C6S9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Cfap54Q8C6S9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.13■□□□□ 0.49
Cfap54Q8C6S9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap54Q8C6S9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap54Q8C6S9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap54Q8C6S9 Gm7367-201ENSMUST00000057611 492 ntBASIC18.12■□□□□ 0.49
Cfap54Q8C6S9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap54Q8C6S9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap54Q8C6S9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap54Q8C6S9 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.12■□□□□ 0.49
Cfap54Q8C6S9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap54Q8C6S9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Cfap54Q8C6S9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap54Q8C6S9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap54Q8C6S9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap54Q8C6S9 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.11■□□□□ 0.49
Cfap54Q8C6S9 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.11■□□□□ 0.49
Cfap54Q8C6S9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap54Q8C6S9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
Cfap54Q8C6S9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cfap54Q8C6S9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap54Q8C6S9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap54Q8C6S9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap54Q8C6S9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap54Q8C6S9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Cfap54Q8C6S9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap54Q8C6S9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.1■□□□□ 0.49
Cfap54Q8C6S9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap54Q8C6S9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap54Q8C6S9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap54Q8C6S9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap54Q8C6S9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
Cfap54Q8C6S9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Cfap54Q8C6S9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cfap54Q8C6S9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cfap54Q8C6S9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cfap54Q8C6S9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cfap54Q8C6S9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cfap54Q8C6S9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms