Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.95■□□□□ 0.3
Col6a6Q8C6K9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a6Q8C6K9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Col6a6Q8C6K9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a6Q8C6K9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a6Q8C6K9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a6Q8C6K9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a6Q8C6K9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a6Q8C6K9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a6Q8C6K9 Gm10231-201ENSMUST00000181584 441 ntBASIC16.95■□□□□ 0.3
Col6a6Q8C6K9 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a6Q8C6K9 Gm10175-202ENSMUST00000208752 441 ntBASIC16.95■□□□□ 0.3
Col6a6Q8C6K9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.95■□□□□ 0.3
Col6a6Q8C6K9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a6Q8C6K9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a6Q8C6K9 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a6Q8C6K9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Col6a6Q8C6K9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a6Q8C6K9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a6Q8C6K9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col6a6Q8C6K9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col6a6Q8C6K9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col6a6Q8C6K9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col6a6Q8C6K9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col6a6Q8C6K9 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.94■□□□□ 0.3
Col6a6Q8C6K9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.94■□□□□ 0.3
Col6a6Q8C6K9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Col6a6Q8C6K9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Col6a6Q8C6K9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col6a6Q8C6K9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.94■□□□□ 0.3
Col6a6Q8C6K9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.94■□□□□ 0.3
Col6a6Q8C6K9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col6a6Q8C6K9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col6a6Q8C6K9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col6a6Q8C6K9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col6a6Q8C6K9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col6a6Q8C6K9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col6a6Q8C6K9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col6a6Q8C6K9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col6a6Q8C6K9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col6a6Q8C6K9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col6a6Q8C6K9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Col6a6Q8C6K9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.93■□□□□ 0.3
Col6a6Q8C6K9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Col6a6Q8C6K9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.93■□□□□ 0.3
Col6a6Q8C6K9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col6a6Q8C6K9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col6a6Q8C6K9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col6a6Q8C6K9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col6a6Q8C6K9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col6a6Q8C6K9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col6a6Q8C6K9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col6a6Q8C6K9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col6a6Q8C6K9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col6a6Q8C6K9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col6a6Q8C6K9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col6a6Q8C6K9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col6a6Q8C6K9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col6a6Q8C6K9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col6a6Q8C6K9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.91■□□□□ 0.3
Col6a6Q8C6K9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Col6a6Q8C6K9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.91■□□□□ 0.3
Col6a6Q8C6K9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col6a6Q8C6K9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.91■□□□□ 0.3
Col6a6Q8C6K9 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.91■□□□□ 0.3
Col6a6Q8C6K9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col6a6Q8C6K9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col6a6Q8C6K9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col6a6Q8C6K9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Col6a6Q8C6K9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col6a6Q8C6K9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Col6a6Q8C6K9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col6a6Q8C6K9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col6a6Q8C6K9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col6a6Q8C6K9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.9■□□□□ 0.3
Col6a6Q8C6K9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col6a6Q8C6K9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col6a6Q8C6K9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col6a6Q8C6K9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col6a6Q8C6K9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col6a6Q8C6K9 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.9■□□□□ 0.3
Col6a6Q8C6K9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col6a6Q8C6K9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col6a6Q8C6K9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col6a6Q8C6K9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Col6a6Q8C6K9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a6Q8C6K9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a6Q8C6K9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a6Q8C6K9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a6Q8C6K9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.89■□□□□ 0.29
Col6a6Q8C6K9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a6Q8C6K9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.89■□□□□ 0.29
Col6a6Q8C6K9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a6Q8C6K9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a6Q8C6K9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.89■□□□□ 0.29
Col6a6Q8C6K9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a6Q8C6K9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Col6a6Q8C6K9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.89■□□□□ 0.29
Col6a6Q8C6K9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a6Q8C6K9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms