Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Usp44Q8C2S0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Usp44Q8C2S0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Usp44Q8C2S0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Usp44Q8C2S0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Usp44Q8C2S0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Usp44Q8C2S0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Usp44Q8C2S0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Usp44Q8C2S0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Usp44Q8C2S0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Usp44Q8C2S0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Usp44Q8C2S0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Usp44Q8C2S0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Usp44Q8C2S0 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC22.08■■□□□ 1.13
Usp44Q8C2S0 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Usp44Q8C2S0 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
Usp44Q8C2S0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Usp44Q8C2S0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Usp44Q8C2S0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Usp44Q8C2S0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Usp44Q8C2S0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Usp44Q8C2S0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Usp44Q8C2S0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Usp44Q8C2S0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Usp44Q8C2S0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Usp44Q8C2S0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Usp44Q8C2S0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Usp44Q8C2S0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Usp44Q8C2S0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Usp44Q8C2S0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Usp44Q8C2S0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Usp44Q8C2S0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Usp44Q8C2S0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Usp44Q8C2S0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Usp44Q8C2S0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Usp44Q8C2S0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Usp44Q8C2S0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Usp44Q8C2S0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Usp44Q8C2S0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC22.05■■□□□ 1.12
Usp44Q8C2S0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC22.05■■□□□ 1.12
Usp44Q8C2S0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Usp44Q8C2S0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Usp44Q8C2S0 Nespas-201ENSMUST00000143738 1083 ntBASIC22.05■■□□□ 1.12
Usp44Q8C2S0 Gm42569-201ENSMUST00000200539 472 ntBASIC22.05■■□□□ 1.12
Usp44Q8C2S0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Usp44Q8C2S0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Usp44Q8C2S0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Usp44Q8C2S0 Gm7856-201ENSMUST00000117514 1493 ntBASIC22.04■■□□□ 1.12
Usp44Q8C2S0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC22.04■■□□□ 1.12
Usp44Q8C2S0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Usp44Q8C2S0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Usp44Q8C2S0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Usp44Q8C2S0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Usp44Q8C2S0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Usp44Q8C2S0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Usp44Q8C2S0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Usp44Q8C2S0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Usp44Q8C2S0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC22.03■■□□□ 1.12
Usp44Q8C2S0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Usp44Q8C2S0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Usp44Q8C2S0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Usp44Q8C2S0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC22.03■■□□□ 1.12
Usp44Q8C2S0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Usp44Q8C2S0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Usp44Q8C2S0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Usp44Q8C2S0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Usp44Q8C2S0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Usp44Q8C2S0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Usp44Q8C2S0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Usp44Q8C2S0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Usp44Q8C2S0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Usp44Q8C2S0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Usp44Q8C2S0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC22.02■■□□□ 1.12
Usp44Q8C2S0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Usp44Q8C2S0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
Usp44Q8C2S0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Usp44Q8C2S0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Usp44Q8C2S0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Usp44Q8C2S0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Usp44Q8C2S0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Usp44Q8C2S0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Usp44Q8C2S0 Gm38342-201ENSMUST00000195710 2980 ntBASIC22■■□□□ 1.11
Usp44Q8C2S0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC22■■□□□ 1.11
Usp44Q8C2S0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Usp44Q8C2S0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Usp44Q8C2S0 Gm27405-201ENSMUST00000184201 112 ntBASIC22■■□□□ 1.11
Usp44Q8C2S0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC22■■□□□ 1.11
Usp44Q8C2S0 Gm6627-201ENSMUST00000218299 2386 ntBASIC22■■□□□ 1.11
Usp44Q8C2S0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Usp44Q8C2S0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Usp44Q8C2S0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Usp44Q8C2S0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Usp44Q8C2S0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Usp44Q8C2S0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Usp44Q8C2S0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Usp44Q8C2S0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Usp44Q8C2S0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Usp44Q8C2S0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Usp44Q8C2S0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Usp44Q8C2S0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms