Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tsen54Q8C2A2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tsen54Q8C2A2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Tsen54Q8C2A2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Tsen54Q8C2A2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tsen54Q8C2A2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tsen54Q8C2A2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tsen54Q8C2A2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tsen54Q8C2A2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.66■□□□□ 0.1
Tsen54Q8C2A2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tsen54Q8C2A2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tsen54Q8C2A2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.66■□□□□ 0.1
Tsen54Q8C2A2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tsen54Q8C2A2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tsen54Q8C2A2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tsen54Q8C2A2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Tsen54Q8C2A2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tsen54Q8C2A2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
Tsen54Q8C2A2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Tsen54Q8C2A2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.66■□□□□ 0.1
Tsen54Q8C2A2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tsen54Q8C2A2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tsen54Q8C2A2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tsen54Q8C2A2 Fst-202ENSMUST00000223640 2612 ntBASIC15.65■□□□□ 0.1
Tsen54Q8C2A2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tsen54Q8C2A2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Tsen54Q8C2A2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tsen54Q8C2A2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tsen54Q8C2A2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tsen54Q8C2A2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tsen54Q8C2A2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tsen54Q8C2A2 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.65■□□□□ 0.1
Tsen54Q8C2A2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tsen54Q8C2A2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tsen54Q8C2A2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tsen54Q8C2A2 Gm9847-201ENSMUST00000052528 599 ntBASIC15.65■□□□□ 0.1
Tsen54Q8C2A2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Tsen54Q8C2A2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.65■□□□□ 0.1
Tsen54Q8C2A2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Tsen54Q8C2A2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tsen54Q8C2A2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tsen54Q8C2A2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tsen54Q8C2A2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tsen54Q8C2A2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.64■□□□□ 0.1
Tsen54Q8C2A2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Tsen54Q8C2A2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tsen54Q8C2A2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tsen54Q8C2A2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tsen54Q8C2A2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tsen54Q8C2A2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tsen54Q8C2A2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tsen54Q8C2A2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tsen54Q8C2A2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tsen54Q8C2A2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tsen54Q8C2A2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tsen54Q8C2A2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Tsen54Q8C2A2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tsen54Q8C2A2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.64■□□□□ 0.09
Tsen54Q8C2A2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tsen54Q8C2A2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tsen54Q8C2A2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.63■□□□□ 0.09
Tsen54Q8C2A2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC15.63■□□□□ 0.09
Tsen54Q8C2A2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.63■□□□□ 0.09
Tsen54Q8C2A2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC15.63■□□□□ 0.09
Tsen54Q8C2A2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tsen54Q8C2A2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
Tsen54Q8C2A2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tsen54Q8C2A2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tsen54Q8C2A2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tsen54Q8C2A2 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Tsen54Q8C2A2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tsen54Q8C2A2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tsen54Q8C2A2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tsen54Q8C2A2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tsen54Q8C2A2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Tsen54Q8C2A2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
Tsen54Q8C2A2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.62■□□□□ 0.09
Tsen54Q8C2A2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.62■□□□□ 0.09
Tsen54Q8C2A2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Tsen54Q8C2A2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Tsen54Q8C2A2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.62■□□□□ 0.09
Tsen54Q8C2A2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC15.62■□□□□ 0.09
Tsen54Q8C2A2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC15.62■□□□□ 0.09
Tsen54Q8C2A2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tsen54Q8C2A2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Tsen54Q8C2A2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Tsen54Q8C2A2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Tsen54Q8C2A2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.61■□□□□ 0.09
Tsen54Q8C2A2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Tsen54Q8C2A2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC15.61■□□□□ 0.09
Tsen54Q8C2A2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC15.61■□□□□ 0.09
Tsen54Q8C2A2 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Tsen54Q8C2A2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Tsen54Q8C2A2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tsen54Q8C2A2 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tsen54Q8C2A2 Gm13241-201ENSMUST00000094493 780 ntBASIC15.61■□□□□ 0.09
Tsen54Q8C2A2 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tsen54Q8C2A2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Tsen54Q8C2A2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC15.61■□□□□ 0.09
Tsen54Q8C2A2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms