Protein–RNA interactions for Protein: Q8C0J2

Atg16l1, Autophagy-related protein 16-1, mousemouse

Predictions only

Length 607 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg16l1Q8C0J2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atg16l1Q8C0J2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atg16l1Q8C0J2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Atg16l1Q8C0J2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atg16l1Q8C0J2 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.72■□□□□ 0.59
Atg16l1Q8C0J2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atg16l1Q8C0J2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atg16l1Q8C0J2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.71■□□□□ 0.59
Atg16l1Q8C0J2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Atg16l1Q8C0J2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Atg16l1Q8C0J2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atg16l1Q8C0J2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atg16l1Q8C0J2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atg16l1Q8C0J2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atg16l1Q8C0J2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atg16l1Q8C0J2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atg16l1Q8C0J2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atg16l1Q8C0J2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Atg16l1Q8C0J2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.71■□□□□ 0.58
Atg16l1Q8C0J2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atg16l1Q8C0J2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atg16l1Q8C0J2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Atg16l1Q8C0J2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atg16l1Q8C0J2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atg16l1Q8C0J2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atg16l1Q8C0J2 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.7■□□□□ 0.58
Atg16l1Q8C0J2 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.7■□□□□ 0.58
Atg16l1Q8C0J2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atg16l1Q8C0J2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Atg16l1Q8C0J2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.7■□□□□ 0.58
Atg16l1Q8C0J2 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.7■□□□□ 0.58
Atg16l1Q8C0J2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Atg16l1Q8C0J2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Atg16l1Q8C0J2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.7■□□□□ 0.58
Atg16l1Q8C0J2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Atg16l1Q8C0J2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Atg16l1Q8C0J2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atg16l1Q8C0J2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atg16l1Q8C0J2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atg16l1Q8C0J2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.69■□□□□ 0.58
Atg16l1Q8C0J2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atg16l1Q8C0J2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atg16l1Q8C0J2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atg16l1Q8C0J2 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Atg16l1Q8C0J2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atg16l1Q8C0J2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atg16l1Q8C0J2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Atg16l1Q8C0J2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Atg16l1Q8C0J2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atg16l1Q8C0J2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.68■□□□□ 0.58
Atg16l1Q8C0J2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
Atg16l1Q8C0J2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
Atg16l1Q8C0J2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Atg16l1Q8C0J2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.68■□□□□ 0.58
Atg16l1Q8C0J2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atg16l1Q8C0J2 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.68■□□□□ 0.58
Atg16l1Q8C0J2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atg16l1Q8C0J2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.68■□□□□ 0.58
Atg16l1Q8C0J2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atg16l1Q8C0J2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atg16l1Q8C0J2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Atg16l1Q8C0J2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.67■□□□□ 0.58
Atg16l1Q8C0J2 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Atg16l1Q8C0J2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.67■□□□□ 0.58
Atg16l1Q8C0J2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.67■□□□□ 0.58
Atg16l1Q8C0J2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Atg16l1Q8C0J2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Atg16l1Q8C0J2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.67■□□□□ 0.58
Atg16l1Q8C0J2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atg16l1Q8C0J2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Atg16l1Q8C0J2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atg16l1Q8C0J2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atg16l1Q8C0J2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atg16l1Q8C0J2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atg16l1Q8C0J2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Atg16l1Q8C0J2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atg16l1Q8C0J2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Atg16l1Q8C0J2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atg16l1Q8C0J2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Atg16l1Q8C0J2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atg16l1Q8C0J2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Atg16l1Q8C0J2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atg16l1Q8C0J2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg16l1Q8C0J2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg16l1Q8C0J2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg16l1Q8C0J2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg16l1Q8C0J2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg16l1Q8C0J2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg16l1Q8C0J2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.65■□□□□ 0.58
Atg16l1Q8C0J2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atg16l1Q8C0J2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg16l1Q8C0J2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg16l1Q8C0J2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg16l1Q8C0J2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Atg16l1Q8C0J2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg16l1Q8C0J2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atg16l1Q8C0J2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Atg16l1Q8C0J2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atg16l1Q8C0J2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Atg16l1Q8C0J2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms