Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Trim47Q8C0E3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim47Q8C0E3 Gm6211-202ENSMUST00000167849 925 ntBASIC20.81■□□□□ 0.92
Trim47Q8C0E3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Trim47Q8C0E3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim47Q8C0E3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim47Q8C0E3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim47Q8C0E3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim47Q8C0E3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim47Q8C0E3 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim47Q8C0E3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim47Q8C0E3 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.8■□□□□ 0.92
Trim47Q8C0E3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.8■□□□□ 0.92
Trim47Q8C0E3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim47Q8C0E3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim47Q8C0E3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Trim47Q8C0E3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim47Q8C0E3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.8■□□□□ 0.92
Trim47Q8C0E3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim47Q8C0E3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Trim47Q8C0E3 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim47Q8C0E3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim47Q8C0E3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim47Q8C0E3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Trim47Q8C0E3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
Trim47Q8C0E3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim47Q8C0E3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Trim47Q8C0E3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim47Q8C0E3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim47Q8C0E3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Trim47Q8C0E3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim47Q8C0E3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim47Q8C0E3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Trim47Q8C0E3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim47Q8C0E3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim47Q8C0E3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim47Q8C0E3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim47Q8C0E3 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Trim47Q8C0E3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim47Q8C0E3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim47Q8C0E3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim47Q8C0E3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim47Q8C0E3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim47Q8C0E3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim47Q8C0E3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim47Q8C0E3 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.78■□□□□ 0.92
Trim47Q8C0E3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim47Q8C0E3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim47Q8C0E3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Trim47Q8C0E3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim47Q8C0E3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim47Q8C0E3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.77■□□□□ 0.92
Trim47Q8C0E3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim47Q8C0E3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim47Q8C0E3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim47Q8C0E3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim47Q8C0E3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim47Q8C0E3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim47Q8C0E3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim47Q8C0E3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.77■□□□□ 0.92
Trim47Q8C0E3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Trim47Q8C0E3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim47Q8C0E3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim47Q8C0E3 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.77■□□□□ 0.91
Trim47Q8C0E3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim47Q8C0E3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Trim47Q8C0E3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Trim47Q8C0E3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim47Q8C0E3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim47Q8C0E3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim47Q8C0E3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim47Q8C0E3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim47Q8C0E3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim47Q8C0E3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim47Q8C0E3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim47Q8C0E3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim47Q8C0E3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim47Q8C0E3 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.75■□□□□ 0.91
Trim47Q8C0E3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim47Q8C0E3 Gm4968-201ENSMUST00000071458 858 ntBASIC20.75■□□□□ 0.91
Trim47Q8C0E3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim47Q8C0E3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim47Q8C0E3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim47Q8C0E3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim47Q8C0E3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim47Q8C0E3 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim47Q8C0E3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.74■□□□□ 0.91
Trim47Q8C0E3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim47Q8C0E3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Trim47Q8C0E3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim47Q8C0E3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Trim47Q8C0E3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim47Q8C0E3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim47Q8C0E3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim47Q8C0E3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim47Q8C0E3 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.73■□□□□ 0.91
Trim47Q8C0E3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim47Q8C0E3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim47Q8C0E3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim47Q8C0E3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms