Protein–RNA interactions for Protein: Q8C0C4

Ccser1, Serine-rich coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccser1Q8C0C4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccser1Q8C0C4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.22■□□□□ 0.83
Ccser1Q8C0C4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccser1Q8C0C4 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccser1Q8C0C4 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ccser1Q8C0C4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ccser1Q8C0C4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccser1Q8C0C4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Ccser1Q8C0C4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccser1Q8C0C4 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccser1Q8C0C4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Ccser1Q8C0C4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Ccser1Q8C0C4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.21■□□□□ 0.83
Ccser1Q8C0C4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ccser1Q8C0C4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.21■□□□□ 0.83
Ccser1Q8C0C4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccser1Q8C0C4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Ccser1Q8C0C4 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Ccser1Q8C0C4 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccser1Q8C0C4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Ccser1Q8C0C4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccser1Q8C0C4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccser1Q8C0C4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccser1Q8C0C4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccser1Q8C0C4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.2■□□□□ 0.82
Ccser1Q8C0C4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccser1Q8C0C4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccser1Q8C0C4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccser1Q8C0C4 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccser1Q8C0C4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Ccser1Q8C0C4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccser1Q8C0C4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccser1Q8C0C4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Ccser1Q8C0C4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccser1Q8C0C4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.19■□□□□ 0.82
Ccser1Q8C0C4 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Ccser1Q8C0C4 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.19■□□□□ 0.82
Ccser1Q8C0C4 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccser1Q8C0C4 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccser1Q8C0C4 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccser1Q8C0C4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.19■□□□□ 0.82
Ccser1Q8C0C4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Ccser1Q8C0C4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.18■□□□□ 0.82
Ccser1Q8C0C4 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.18■□□□□ 0.82
Ccser1Q8C0C4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccser1Q8C0C4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccser1Q8C0C4 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccser1Q8C0C4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccser1Q8C0C4 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.17■□□□□ 0.82
Ccser1Q8C0C4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccser1Q8C0C4 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccser1Q8C0C4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ccser1Q8C0C4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.17■□□□□ 0.82
Ccser1Q8C0C4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccser1Q8C0C4 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.17■□□□□ 0.82
Ccser1Q8C0C4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccser1Q8C0C4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccser1Q8C0C4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccser1Q8C0C4 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Ccser1Q8C0C4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccser1Q8C0C4 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccser1Q8C0C4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccser1Q8C0C4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccser1Q8C0C4 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccser1Q8C0C4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccser1Q8C0C4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccser1Q8C0C4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Ccser1Q8C0C4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccser1Q8C0C4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccser1Q8C0C4 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccser1Q8C0C4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccser1Q8C0C4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccser1Q8C0C4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccser1Q8C0C4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccser1Q8C0C4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccser1Q8C0C4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccser1Q8C0C4 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.15■□□□□ 0.82
Ccser1Q8C0C4 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccser1Q8C0C4 Gm4968-201ENSMUST00000071458 858 ntBASIC20.15■□□□□ 0.82
Ccser1Q8C0C4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccser1Q8C0C4 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Ccser1Q8C0C4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccser1Q8C0C4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.15■□□□□ 0.82
Ccser1Q8C0C4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Ccser1Q8C0C4 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccser1Q8C0C4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Ccser1Q8C0C4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccser1Q8C0C4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccser1Q8C0C4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ccser1Q8C0C4 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ccser1Q8C0C4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Ccser1Q8C0C4 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccser1Q8C0C4 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccser1Q8C0C4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccser1Q8C0C4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccser1Q8C0C4 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccser1Q8C0C4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccser1Q8C0C4 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.14■□□□□ 0.81
Ccser1Q8C0C4 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.14■□□□□ 0.81
Ccser1Q8C0C4 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms