Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3rf2Q8BZT2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3rf2Q8BZT2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3rf2Q8BZT2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3rf2Q8BZT2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Sh3rf2Q8BZT2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3rf2Q8BZT2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3rf2Q8BZT2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Sh3rf2Q8BZT2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3rf2Q8BZT2 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.04■□□□□ 0.64
Sh3rf2Q8BZT2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.04■□□□□ 0.64
Sh3rf2Q8BZT2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3rf2Q8BZT2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Sh3rf2Q8BZT2 Gm13168-201ENSMUST00000121771 632 ntBASIC19.04■□□□□ 0.64
Sh3rf2Q8BZT2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3rf2Q8BZT2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.04■□□□□ 0.64
Sh3rf2Q8BZT2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3rf2Q8BZT2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.04■□□□□ 0.64
Sh3rf2Q8BZT2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3rf2Q8BZT2 Trmt13-210ENSMUST00000198454 880 ntBASIC19.04■□□□□ 0.64
Sh3rf2Q8BZT2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3rf2Q8BZT2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3rf2Q8BZT2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
Sh3rf2Q8BZT2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3rf2Q8BZT2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3rf2Q8BZT2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3rf2Q8BZT2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.04■□□□□ 0.64
Sh3rf2Q8BZT2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3rf2Q8BZT2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3rf2Q8BZT2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.03■□□□□ 0.64
Sh3rf2Q8BZT2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.03■□□□□ 0.64
Sh3rf2Q8BZT2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Sh3rf2Q8BZT2 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3rf2Q8BZT2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3rf2Q8BZT2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Sh3rf2Q8BZT2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3rf2Q8BZT2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3rf2Q8BZT2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Sh3rf2Q8BZT2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3rf2Q8BZT2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3rf2Q8BZT2 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.02■□□□□ 0.64
Sh3rf2Q8BZT2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3rf2Q8BZT2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sh3rf2Q8BZT2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sh3rf2Q8BZT2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sh3rf2Q8BZT2 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Sh3rf2Q8BZT2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3rf2Q8BZT2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Sh3rf2Q8BZT2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3rf2Q8BZT2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3rf2Q8BZT2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3rf2Q8BZT2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3rf2Q8BZT2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3rf2Q8BZT2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3rf2Q8BZT2 Golph3-202ENSMUST00000226517 2359 ntBASIC19.01■□□□□ 0.63
Sh3rf2Q8BZT2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3rf2Q8BZT2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3rf2Q8BZT2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3rf2Q8BZT2 Gm12896-201ENSMUST00000118430 226 ntBASIC19■□□□□ 0.63
Sh3rf2Q8BZT2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19■□□□□ 0.63
Sh3rf2Q8BZT2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Sh3rf2Q8BZT2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19■□□□□ 0.63
Sh3rf2Q8BZT2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19■□□□□ 0.63
Sh3rf2Q8BZT2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3rf2Q8BZT2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3rf2Q8BZT2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19■□□□□ 0.63
Sh3rf2Q8BZT2 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3rf2Q8BZT2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sh3rf2Q8BZT2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3rf2Q8BZT2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3rf2Q8BZT2 Gm43672-201ENSMUST00000199072 1731 ntBASIC19■□□□□ 0.63
Sh3rf2Q8BZT2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Sh3rf2Q8BZT2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3rf2Q8BZT2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3rf2Q8BZT2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Sh3rf2Q8BZT2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.99■□□□□ 0.63
Sh3rf2Q8BZT2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3rf2Q8BZT2 Gm27275-201ENSMUST00000184318 272 ntBASIC18.99■□□□□ 0.63
Sh3rf2Q8BZT2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.99■□□□□ 0.63
Sh3rf2Q8BZT2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.99■□□□□ 0.63
Sh3rf2Q8BZT2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3rf2Q8BZT2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Sh3rf2Q8BZT2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3rf2Q8BZT2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3rf2Q8BZT2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3rf2Q8BZT2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Sh3rf2Q8BZT2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3rf2Q8BZT2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3rf2Q8BZT2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3rf2Q8BZT2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.98■□□□□ 0.63
Sh3rf2Q8BZT2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3rf2Q8BZT2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3rf2Q8BZT2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3rf2Q8BZT2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Sh3rf2Q8BZT2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Sh3rf2Q8BZT2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3rf2Q8BZT2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3rf2Q8BZT2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
Sh3rf2Q8BZT2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3rf2Q8BZT2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms