Protein–RNA interactions for Protein: Q8BY89

Slc44a2, Choline transporter-like protein 2, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a2Q8BY89 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc44a2Q8BY89 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc44a2Q8BY89 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc44a2Q8BY89 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Slc44a2Q8BY89 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc44a2Q8BY89 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.21■□□□□ 0.51
Slc44a2Q8BY89 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc44a2Q8BY89 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slc44a2Q8BY89 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.21■□□□□ 0.51
Slc44a2Q8BY89 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Slc44a2Q8BY89 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc44a2Q8BY89 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc44a2Q8BY89 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc44a2Q8BY89 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.21■□□□□ 0.51
Slc44a2Q8BY89 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc44a2Q8BY89 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc44a2Q8BY89 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Slc44a2Q8BY89 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Slc44a2Q8BY89 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc44a2Q8BY89 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.2■□□□□ 0.5
Slc44a2Q8BY89 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc44a2Q8BY89 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc44a2Q8BY89 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Slc44a2Q8BY89 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Slc44a2Q8BY89 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.2■□□□□ 0.5
Slc44a2Q8BY89 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc44a2Q8BY89 Gm21956-201ENSMUST00000179946 522 ntBASIC18.2■□□□□ 0.5
Slc44a2Q8BY89 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.2■□□□□ 0.5
Slc44a2Q8BY89 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc44a2Q8BY89 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc44a2Q8BY89 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Slc44a2Q8BY89 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc44a2Q8BY89 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc44a2Q8BY89 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Slc44a2Q8BY89 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Slc44a2Q8BY89 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc44a2Q8BY89 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc44a2Q8BY89 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slc44a2Q8BY89 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Slc44a2Q8BY89 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc44a2Q8BY89 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc44a2Q8BY89 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc44a2Q8BY89 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc44a2Q8BY89 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc44a2Q8BY89 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc44a2Q8BY89 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.19■□□□□ 0.5
Slc44a2Q8BY89 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slc44a2Q8BY89 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc44a2Q8BY89 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc44a2Q8BY89 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc44a2Q8BY89 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc44a2Q8BY89 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc44a2Q8BY89 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slc44a2Q8BY89 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc44a2Q8BY89 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slc44a2Q8BY89 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc44a2Q8BY89 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc44a2Q8BY89 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Slc44a2Q8BY89 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc44a2Q8BY89 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc44a2Q8BY89 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc44a2Q8BY89 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc44a2Q8BY89 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Slc44a2Q8BY89 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Slc44a2Q8BY89 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Slc44a2Q8BY89 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc44a2Q8BY89 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Slc44a2Q8BY89 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc44a2Q8BY89 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc44a2Q8BY89 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc44a2Q8BY89 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Slc44a2Q8BY89 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc44a2Q8BY89 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc44a2Q8BY89 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc44a2Q8BY89 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.17■□□□□ 0.5
Slc44a2Q8BY89 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.17■□□□□ 0.5
Slc44a2Q8BY89 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.17■□□□□ 0.5
Slc44a2Q8BY89 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slc44a2Q8BY89 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc44a2Q8BY89 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc44a2Q8BY89 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc44a2Q8BY89 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc44a2Q8BY89 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc44a2Q8BY89 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc44a2Q8BY89 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc44a2Q8BY89 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Slc44a2Q8BY89 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.16■□□□□ 0.5
Slc44a2Q8BY89 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc44a2Q8BY89 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc44a2Q8BY89 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.16■□□□□ 0.5
Slc44a2Q8BY89 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Slc44a2Q8BY89 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.15■□□□□ 0.5
Slc44a2Q8BY89 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc44a2Q8BY89 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc44a2Q8BY89 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.15■□□□□ 0.5
Slc44a2Q8BY89 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Slc44a2Q8BY89 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc44a2Q8BY89 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc44a2Q8BY89 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Slc44a2Q8BY89 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms