Protein–RNA interactions for Protein: Q8BV16

Zfp398, Zinc finger protein 398, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp398Q8BV16 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Zfp398Q8BV16 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zfp398Q8BV16 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zfp398Q8BV16 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zfp398Q8BV16 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zfp398Q8BV16 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zfp398Q8BV16 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.78■□□□□ 0.6
Zfp398Q8BV16 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zfp398Q8BV16 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zfp398Q8BV16 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Zfp398Q8BV16 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Zfp398Q8BV16 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Zfp398Q8BV16 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
Zfp398Q8BV16 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zfp398Q8BV16 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
Zfp398Q8BV16 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zfp398Q8BV16 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.78■□□□□ 0.6
Zfp398Q8BV16 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zfp398Q8BV16 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zfp398Q8BV16 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.78■□□□□ 0.6
Zfp398Q8BV16 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zfp398Q8BV16 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Zfp398Q8BV16 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zfp398Q8BV16 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Zfp398Q8BV16 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Zfp398Q8BV16 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Zfp398Q8BV16 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Zfp398Q8BV16 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Zfp398Q8BV16 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Zfp398Q8BV16 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Zfp398Q8BV16 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Zfp398Q8BV16 Gm45417-201ENSMUST00000209533 758 ntBASIC18.77■□□□□ 0.6
Zfp398Q8BV16 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Zfp398Q8BV16 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Zfp398Q8BV16 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Zfp398Q8BV16 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Zfp398Q8BV16 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Zfp398Q8BV16 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Zfp398Q8BV16 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.77■□□□□ 0.59
Zfp398Q8BV16 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Zfp398Q8BV16 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Zfp398Q8BV16 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.76■□□□□ 0.59
Zfp398Q8BV16 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Zfp398Q8BV16 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Zfp398Q8BV16 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Zfp398Q8BV16 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.76■□□□□ 0.59
Zfp398Q8BV16 Gm40848-201ENSMUST00000221998 324 ntBASIC18.76■□□□□ 0.59
Zfp398Q8BV16 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Zfp398Q8BV16 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Zfp398Q8BV16 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Zfp398Q8BV16 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Zfp398Q8BV16 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Zfp398Q8BV16 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Zfp398Q8BV16 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Zfp398Q8BV16 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Zfp398Q8BV16 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Zfp398Q8BV16 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Zfp398Q8BV16 Gm26833-201ENSMUST00000180899 440 ntBASIC18.75■□□□□ 0.59
Zfp398Q8BV16 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Zfp398Q8BV16 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Zfp398Q8BV16 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Zfp398Q8BV16 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Zfp398Q8BV16 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Zfp398Q8BV16 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Zfp398Q8BV16 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Zfp398Q8BV16 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Zfp398Q8BV16 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Zfp398Q8BV16 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Zfp398Q8BV16 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Zfp398Q8BV16 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Zfp398Q8BV16 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Zfp398Q8BV16 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Zfp398Q8BV16 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Zfp398Q8BV16 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Zfp398Q8BV16 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Zfp398Q8BV16 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Zfp398Q8BV16 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Zfp398Q8BV16 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.74■□□□□ 0.59
Zfp398Q8BV16 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Zfp398Q8BV16 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Zfp398Q8BV16 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Zfp398Q8BV16 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Zfp398Q8BV16 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Zfp398Q8BV16 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
Zfp398Q8BV16 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Zfp398Q8BV16 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Zfp398Q8BV16 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Zfp398Q8BV16 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Zfp398Q8BV16 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Zfp398Q8BV16 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Zfp398Q8BV16 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Zfp398Q8BV16 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Zfp398Q8BV16 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Zfp398Q8BV16 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Zfp398Q8BV16 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Zfp398Q8BV16 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Zfp398Q8BV16 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Zfp398Q8BV16 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Zfp398Q8BV16 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Zfp398Q8BV16 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms