Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.79■□□□□ 0.44
Cdk5rap1Q8BTW8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Cdk5rap1Q8BTW8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Cdk5rap1Q8BTW8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdk5rap1Q8BTW8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
Cdk5rap1Q8BTW8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdk5rap1Q8BTW8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdk5rap1Q8BTW8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.79■□□□□ 0.44
Cdk5rap1Q8BTW8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdk5rap1Q8BTW8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.78■□□□□ 0.44
Cdk5rap1Q8BTW8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdk5rap1Q8BTW8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdk5rap1Q8BTW8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Cdk5rap1Q8BTW8 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdk5rap1Q8BTW8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.78■□□□□ 0.44
Cdk5rap1Q8BTW8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Cdk5rap1Q8BTW8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.78■□□□□ 0.44
Cdk5rap1Q8BTW8 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cdk5rap1Q8BTW8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cdk5rap1Q8BTW8 Rab3c-203ENSMUST00000224180 967 ntBASIC17.78■□□□□ 0.44
Cdk5rap1Q8BTW8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.78■□□□□ 0.44
Cdk5rap1Q8BTW8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdk5rap1Q8BTW8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdk5rap1Q8BTW8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdk5rap1Q8BTW8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdk5rap1Q8BTW8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdk5rap1Q8BTW8 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdk5rap1Q8BTW8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdk5rap1Q8BTW8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdk5rap1Q8BTW8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cdk5rap1Q8BTW8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdk5rap1Q8BTW8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdk5rap1Q8BTW8 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.77■□□□□ 0.44
Cdk5rap1Q8BTW8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdk5rap1Q8BTW8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
Cdk5rap1Q8BTW8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cdk5rap1Q8BTW8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdk5rap1Q8BTW8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdk5rap1Q8BTW8 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Cdk5rap1Q8BTW8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdk5rap1Q8BTW8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cdk5rap1Q8BTW8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cdk5rap1Q8BTW8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdk5rap1Q8BTW8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Cdk5rap1Q8BTW8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.76■□□□□ 0.43
Cdk5rap1Q8BTW8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.76■□□□□ 0.43
Cdk5rap1Q8BTW8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdk5rap1Q8BTW8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cdk5rap1Q8BTW8 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdk5rap1Q8BTW8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cdk5rap1Q8BTW8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdk5rap1Q8BTW8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.75■□□□□ 0.43
Cdk5rap1Q8BTW8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdk5rap1Q8BTW8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cdk5rap1Q8BTW8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cdk5rap1Q8BTW8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdk5rap1Q8BTW8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdk5rap1Q8BTW8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cdk5rap1Q8BTW8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cdk5rap1Q8BTW8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdk5rap1Q8BTW8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdk5rap1Q8BTW8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdk5rap1Q8BTW8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Cdk5rap1Q8BTW8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdk5rap1Q8BTW8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cdk5rap1Q8BTW8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cdk5rap1Q8BTW8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cdk5rap1Q8BTW8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk5rap1Q8BTW8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.74■□□□□ 0.43
Cdk5rap1Q8BTW8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Cdk5rap1Q8BTW8 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.74■□□□□ 0.43
Cdk5rap1Q8BTW8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk5rap1Q8BTW8 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk5rap1Q8BTW8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk5rap1Q8BTW8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk5rap1Q8BTW8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cdk5rap1Q8BTW8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk5rap1Q8BTW8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk5rap1Q8BTW8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdk5rap1Q8BTW8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdk5rap1Q8BTW8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdk5rap1Q8BTW8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cdk5rap1Q8BTW8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdk5rap1Q8BTW8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Cdk5rap1Q8BTW8 Gm12527-201ENSMUST00000117967 564 ntBASIC17.73■□□□□ 0.43
Cdk5rap1Q8BTW8 Gm10653-202ENSMUST00000139570 835 ntBASIC17.73■□□□□ 0.43
Cdk5rap1Q8BTW8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.73■□□□□ 0.43
Cdk5rap1Q8BTW8 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.73■□□□□ 0.43
Cdk5rap1Q8BTW8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdk5rap1Q8BTW8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdk5rap1Q8BTW8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdk5rap1Q8BTW8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.72■□□□□ 0.43
Cdk5rap1Q8BTW8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cdk5rap1Q8BTW8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk5rap1Q8BTW8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk5rap1Q8BTW8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk5rap1Q8BTW8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.72■□□□□ 0.43
Cdk5rap1Q8BTW8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk5rap1Q8BTW8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk5rap1Q8BTW8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms