Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scfd1Q8BRF7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Scfd1Q8BRF7 Gm12896-201ENSMUST00000118430 226 ntBASIC21.54■■□□□ 1.04
Scfd1Q8BRF7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.54■■□□□ 1.04
Scfd1Q8BRF7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.54■■□□□ 1.04
Scfd1Q8BRF7 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.54■■□□□ 1.04
Scfd1Q8BRF7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Scfd1Q8BRF7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.54■■□□□ 1.04
Scfd1Q8BRF7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scfd1Q8BRF7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scfd1Q8BRF7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Scfd1Q8BRF7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scfd1Q8BRF7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scfd1Q8BRF7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scfd1Q8BRF7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Scfd1Q8BRF7 Gm44549-201ENSMUST00000208351 577 ntBASIC21.53■■□□□ 1.04
Scfd1Q8BRF7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scfd1Q8BRF7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Scfd1Q8BRF7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Scfd1Q8BRF7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.52■■□□□ 1.04
Scfd1Q8BRF7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scfd1Q8BRF7 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scfd1Q8BRF7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scfd1Q8BRF7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
Scfd1Q8BRF7 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Scfd1Q8BRF7 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scfd1Q8BRF7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scfd1Q8BRF7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Scfd1Q8BRF7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Scfd1Q8BRF7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Scfd1Q8BRF7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.51■■□□□ 1.03
Scfd1Q8BRF7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Scfd1Q8BRF7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
Scfd1Q8BRF7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.51■■□□□ 1.03
Scfd1Q8BRF7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scfd1Q8BRF7 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scfd1Q8BRF7 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scfd1Q8BRF7 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Scfd1Q8BRF7 Gm2559-201ENSMUST00000201323 363 ntBASIC21.51■■□□□ 1.03
Scfd1Q8BRF7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scfd1Q8BRF7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scfd1Q8BRF7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scfd1Q8BRF7 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scfd1Q8BRF7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scfd1Q8BRF7 Gm27275-201ENSMUST00000184318 272 ntBASIC21.5■■□□□ 1.03
Scfd1Q8BRF7 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Scfd1Q8BRF7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Scfd1Q8BRF7 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scfd1Q8BRF7 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scfd1Q8BRF7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scfd1Q8BRF7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scfd1Q8BRF7 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scfd1Q8BRF7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scfd1Q8BRF7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scfd1Q8BRF7 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Scfd1Q8BRF7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scfd1Q8BRF7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.49■■□□□ 1.03
Scfd1Q8BRF7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC21.49■■□□□ 1.03
Scfd1Q8BRF7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scfd1Q8BRF7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scfd1Q8BRF7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
Scfd1Q8BRF7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scfd1Q8BRF7 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Scfd1Q8BRF7 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Scfd1Q8BRF7 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scfd1Q8BRF7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scfd1Q8BRF7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scfd1Q8BRF7 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scfd1Q8BRF7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scfd1Q8BRF7 Dio3-201ENSMUST00000097228 1449 ntBASIC21.47■■□□□ 1.03
Scfd1Q8BRF7 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Scfd1Q8BRF7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Scfd1Q8BRF7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scfd1Q8BRF7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Scfd1Q8BRF7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Scfd1Q8BRF7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Scfd1Q8BRF7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scfd1Q8BRF7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.46■■□□□ 1.03
Scfd1Q8BRF7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
Scfd1Q8BRF7 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.46■■□□□ 1.03
Scfd1Q8BRF7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scfd1Q8BRF7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scfd1Q8BRF7 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scfd1Q8BRF7 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Scfd1Q8BRF7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scfd1Q8BRF7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
Scfd1Q8BRF7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scfd1Q8BRF7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Scfd1Q8BRF7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scfd1Q8BRF7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.45■■□□□ 1.02
Scfd1Q8BRF7 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scfd1Q8BRF7 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scfd1Q8BRF7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scfd1Q8BRF7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Scfd1Q8BRF7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scfd1Q8BRF7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Scfd1Q8BRF7 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.45■■□□□ 1.02
Scfd1Q8BRF7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scfd1Q8BRF7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Scfd1Q8BRF7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms