Protein–RNA interactions for Protein: Q8BP97

Rhbdd3, Rhomboid domain-containing protein 3, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhbdd3Q8BP97 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rhbdd3Q8BP97 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rhbdd3Q8BP97 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rhbdd3Q8BP97 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Rhbdd3Q8BP97 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.15■□□□□ 0.34
Rhbdd3Q8BP97 Gm45417-201ENSMUST00000209533 758 ntBASIC17.15■□□□□ 0.34
Rhbdd3Q8BP97 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rhbdd3Q8BP97 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rhbdd3Q8BP97 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rhbdd3Q8BP97 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rhbdd3Q8BP97 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.15■□□□□ 0.34
Rhbdd3Q8BP97 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Rhbdd3Q8BP97 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rhbdd3Q8BP97 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rhbdd3Q8BP97 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rhbdd3Q8BP97 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rhbdd3Q8BP97 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.14■□□□□ 0.33
Rhbdd3Q8BP97 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.14■□□□□ 0.33
Rhbdd3Q8BP97 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
Rhbdd3Q8BP97 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rhbdd3Q8BP97 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rhbdd3Q8BP97 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rhbdd3Q8BP97 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rhbdd3Q8BP97 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rhbdd3Q8BP97 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rhbdd3Q8BP97 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rhbdd3Q8BP97 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rhbdd3Q8BP97 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Rhbdd3Q8BP97 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rhbdd3Q8BP97 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rhbdd3Q8BP97 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.13■□□□□ 0.33
Rhbdd3Q8BP97 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rhbdd3Q8BP97 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rhbdd3Q8BP97 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rhbdd3Q8BP97 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rhbdd3Q8BP97 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rhbdd3Q8BP97 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rhbdd3Q8BP97 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rhbdd3Q8BP97 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdd3Q8BP97 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rhbdd3Q8BP97 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdd3Q8BP97 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdd3Q8BP97 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdd3Q8BP97 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rhbdd3Q8BP97 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdd3Q8BP97 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdd3Q8BP97 Gm12821-201ENSMUST00000120022 600 ntBASIC17.12■□□□□ 0.33
Rhbdd3Q8BP97 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
Rhbdd3Q8BP97 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.12■□□□□ 0.33
Rhbdd3Q8BP97 Gm40848-201ENSMUST00000221998 324 ntBASIC17.12■□□□□ 0.33
Rhbdd3Q8BP97 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdd3Q8BP97 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdd3Q8BP97 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdd3Q8BP97 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdd3Q8BP97 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdd3Q8BP97 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdd3Q8BP97 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdd3Q8BP97 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdd3Q8BP97 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdd3Q8BP97 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rhbdd3Q8BP97 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rhbdd3Q8BP97 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rhbdd3Q8BP97 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rhbdd3Q8BP97 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rhbdd3Q8BP97 Gm6139-201ENSMUST00000079261 882 ntBASIC17.11■□□□□ 0.33
Rhbdd3Q8BP97 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rhbdd3Q8BP97 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rhbdd3Q8BP97 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.11■□□□□ 0.33
Rhbdd3Q8BP97 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rhbdd3Q8BP97 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rhbdd3Q8BP97 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdd3Q8BP97 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rhbdd3Q8BP97 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdd3Q8BP97 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdd3Q8BP97 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rhbdd3Q8BP97 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdd3Q8BP97 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdd3Q8BP97 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rhbdd3Q8BP97 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Rhbdd3Q8BP97 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdd3Q8BP97 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdd3Q8BP97 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
Rhbdd3Q8BP97 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdd3Q8BP97 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Rhbdd3Q8BP97 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.1■□□□□ 0.33
Rhbdd3Q8BP97 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rhbdd3Q8BP97 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdd3Q8BP97 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rhbdd3Q8BP97 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdd3Q8BP97 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdd3Q8BP97 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdd3Q8BP97 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.1■□□□□ 0.33
Rhbdd3Q8BP97 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdd3Q8BP97 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdd3Q8BP97 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdd3Q8BP97 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdd3Q8BP97 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rhbdd3Q8BP97 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rhbdd3Q8BP97 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rhbdd3Q8BP97 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms