Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf18Q8BM39 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf18Q8BM39 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf18Q8BM39 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf18Q8BM39 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf18Q8BM39 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf18Q8BM39 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf18Q8BM39 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf18Q8BM39 Gm12922-201ENSMUST00000120626 809 ntBASIC17.8■□□□□ 0.44
Prpf18Q8BM39 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.8■□□□□ 0.44
Prpf18Q8BM39 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf18Q8BM39 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf18Q8BM39 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf18Q8BM39 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf18Q8BM39 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Prpf18Q8BM39 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Prpf18Q8BM39 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Prpf18Q8BM39 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf18Q8BM39 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf18Q8BM39 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.79■□□□□ 0.44
Prpf18Q8BM39 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Prpf18Q8BM39 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf18Q8BM39 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf18Q8BM39 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.79■□□□□ 0.44
Prpf18Q8BM39 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf18Q8BM39 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Prpf18Q8BM39 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf18Q8BM39 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf18Q8BM39 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf18Q8BM39 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf18Q8BM39 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf18Q8BM39 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf18Q8BM39 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf18Q8BM39 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf18Q8BM39 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf18Q8BM39 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf18Q8BM39 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf18Q8BM39 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.78■□□□□ 0.44
Prpf18Q8BM39 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf18Q8BM39 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf18Q8BM39 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf18Q8BM39 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.78■□□□□ 0.44
Prpf18Q8BM39 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf18Q8BM39 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.78■□□□□ 0.44
Prpf18Q8BM39 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.78■□□□□ 0.44
Prpf18Q8BM39 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf18Q8BM39 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf18Q8BM39 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf18Q8BM39 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Prpf18Q8BM39 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf18Q8BM39 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf18Q8BM39 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Prpf18Q8BM39 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.77■□□□□ 0.44
Prpf18Q8BM39 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf18Q8BM39 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf18Q8BM39 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf18Q8BM39 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Prpf18Q8BM39 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf18Q8BM39 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf18Q8BM39 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf18Q8BM39 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.77■□□□□ 0.44
Prpf18Q8BM39 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf18Q8BM39 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Prpf18Q8BM39 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Prpf18Q8BM39 AA386476-201ENSMUST00000098781 1665 ntBASIC17.77■□□□□ 0.43
Prpf18Q8BM39 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Prpf18Q8BM39 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Prpf18Q8BM39 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf18Q8BM39 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf18Q8BM39 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf18Q8BM39 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf18Q8BM39 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf18Q8BM39 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf18Q8BM39 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf18Q8BM39 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf18Q8BM39 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf18Q8BM39 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf18Q8BM39 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf18Q8BM39 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.76■□□□□ 0.43
Prpf18Q8BM39 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf18Q8BM39 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf18Q8BM39 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf18Q8BM39 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf18Q8BM39 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf18Q8BM39 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Prpf18Q8BM39 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Prpf18Q8BM39 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf18Q8BM39 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf18Q8BM39 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.75■□□□□ 0.43
Prpf18Q8BM39 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf18Q8BM39 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Prpf18Q8BM39 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf18Q8BM39 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Prpf18Q8BM39 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf18Q8BM39 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf18Q8BM39 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf18Q8BM39 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf18Q8BM39 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.75■□□□□ 0.43
Prpf18Q8BM39 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.75■□□□□ 0.43
Prpf18Q8BM39 Golgb1-201ENSMUST00000023534 498 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms