Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Col16a1Q8BLX7 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Col16a1Q8BLX7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Col16a1Q8BLX7 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Col16a1Q8BLX7 Gm6433-201ENSMUST00000118634 875 ntBASIC24.95■■□□□ 1.58
Col16a1Q8BLX7 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Col16a1Q8BLX7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Col16a1Q8BLX7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
Col16a1Q8BLX7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Col16a1Q8BLX7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Col16a1Q8BLX7 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Col16a1Q8BLX7 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
Col16a1Q8BLX7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Col16a1Q8BLX7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Col16a1Q8BLX7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Col16a1Q8BLX7 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Col16a1Q8BLX7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
Col16a1Q8BLX7 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Col16a1Q8BLX7 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Col16a1Q8BLX7 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Col16a1Q8BLX7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC24.93■■□□□ 1.58
Col16a1Q8BLX7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Col16a1Q8BLX7 AC160393.1-201ENSMUST00000218378 1279 ntBASIC24.93■■□□□ 1.58
Col16a1Q8BLX7 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Col16a1Q8BLX7 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Col16a1Q8BLX7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
Col16a1Q8BLX7 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
Col16a1Q8BLX7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Col16a1Q8BLX7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Col16a1Q8BLX7 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Col16a1Q8BLX7 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Col16a1Q8BLX7 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC24.92■■□□□ 1.58
Col16a1Q8BLX7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
Col16a1Q8BLX7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Col16a1Q8BLX7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC24.92■■□□□ 1.58
Col16a1Q8BLX7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
Col16a1Q8BLX7 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Col16a1Q8BLX7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Col16a1Q8BLX7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC24.91■■□□□ 1.58
Col16a1Q8BLX7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Col16a1Q8BLX7 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Col16a1Q8BLX7 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Col16a1Q8BLX7 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
Col16a1Q8BLX7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Col16a1Q8BLX7 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Col16a1Q8BLX7 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Col16a1Q8BLX7 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Col16a1Q8BLX7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
Col16a1Q8BLX7 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC24.9■■□□□ 1.58
Col16a1Q8BLX7 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
Col16a1Q8BLX7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Col16a1Q8BLX7 Gm8668-201ENSMUST00000120559 1447 ntBASIC24.89■■□□□ 1.58
Col16a1Q8BLX7 Gm11927-201ENSMUST00000118472 759 ntBASIC24.89■■□□□ 1.58
Col16a1Q8BLX7 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC24.89■■□□□ 1.58
Col16a1Q8BLX7 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
Col16a1Q8BLX7 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
Col16a1Q8BLX7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Col16a1Q8BLX7 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC24.89■■□□□ 1.58
Col16a1Q8BLX7 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Col16a1Q8BLX7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Col16a1Q8BLX7 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Col16a1Q8BLX7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Col16a1Q8BLX7 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC24.89■■□□□ 1.57
Col16a1Q8BLX7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC24.89■■□□□ 1.57
Col16a1Q8BLX7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
Col16a1Q8BLX7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Col16a1Q8BLX7 Gm5417-201ENSMUST00000079706 384 ntBASIC24.88■■□□□ 1.57
Col16a1Q8BLX7 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Col16a1Q8BLX7 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Col16a1Q8BLX7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
Col16a1Q8BLX7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Col16a1Q8BLX7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Col16a1Q8BLX7 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC24.88■■□□□ 1.57
Col16a1Q8BLX7 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Col16a1Q8BLX7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
Col16a1Q8BLX7 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Col16a1Q8BLX7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Col16a1Q8BLX7 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Col16a1Q8BLX7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Col16a1Q8BLX7 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
Col16a1Q8BLX7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Col16a1Q8BLX7 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Col16a1Q8BLX7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Col16a1Q8BLX7 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Col16a1Q8BLX7 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Col16a1Q8BLX7 Gm21814-202ENSMUST00000203277 873 ntBASIC24.87■■□□□ 1.57
Col16a1Q8BLX7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Col16a1Q8BLX7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Col16a1Q8BLX7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Col16a1Q8BLX7 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
Col16a1Q8BLX7 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Col16a1Q8BLX7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Col16a1Q8BLX7 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC24.86■■□□□ 1.57
Col16a1Q8BLX7 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
Col16a1Q8BLX7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
Col16a1Q8BLX7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Col16a1Q8BLX7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Col16a1Q8BLX7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Col16a1Q8BLX7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Col16a1Q8BLX7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms