Protein–RNA interactions for Protein: Q8BLR2

Cpne4, Copine-4, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne4Q8BLR2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.74■□□□□ 0.27
Cpne4Q8BLR2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpne4Q8BLR2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpne4Q8BLR2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpne4Q8BLR2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpne4Q8BLR2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpne4Q8BLR2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Cpne4Q8BLR2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Cpne4Q8BLR2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cpne4Q8BLR2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpne4Q8BLR2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpne4Q8BLR2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cpne4Q8BLR2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpne4Q8BLR2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpne4Q8BLR2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpne4Q8BLR2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpne4Q8BLR2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.73■□□□□ 0.27
Cpne4Q8BLR2 Gm6420-201ENSMUST00000193885 723 ntBASIC16.73■□□□□ 0.27
Cpne4Q8BLR2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.73■□□□□ 0.27
Cpne4Q8BLR2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpne4Q8BLR2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpne4Q8BLR2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpne4Q8BLR2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpne4Q8BLR2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpne4Q8BLR2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpne4Q8BLR2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpne4Q8BLR2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpne4Q8BLR2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpne4Q8BLR2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpne4Q8BLR2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpne4Q8BLR2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cpne4Q8BLR2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpne4Q8BLR2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpne4Q8BLR2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cpne4Q8BLR2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cpne4Q8BLR2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.72■□□□□ 0.27
Cpne4Q8BLR2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpne4Q8BLR2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cpne4Q8BLR2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cpne4Q8BLR2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpne4Q8BLR2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpne4Q8BLR2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpne4Q8BLR2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpne4Q8BLR2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpne4Q8BLR2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpne4Q8BLR2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpne4Q8BLR2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cpne4Q8BLR2 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.71■□□□□ 0.27
Cpne4Q8BLR2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cpne4Q8BLR2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cpne4Q8BLR2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cpne4Q8BLR2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cpne4Q8BLR2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cpne4Q8BLR2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne4Q8BLR2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne4Q8BLR2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cpne4Q8BLR2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Cpne4Q8BLR2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cpne4Q8BLR2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne4Q8BLR2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne4Q8BLR2 Nespas-201ENSMUST00000143738 1083 ntBASIC16.7■□□□□ 0.26
Cpne4Q8BLR2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cpne4Q8BLR2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne4Q8BLR2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Cpne4Q8BLR2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne4Q8BLR2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cpne4Q8BLR2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Cpne4Q8BLR2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne4Q8BLR2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne4Q8BLR2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cpne4Q8BLR2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne4Q8BLR2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne4Q8BLR2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne4Q8BLR2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne4Q8BLR2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne4Q8BLR2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.69■□□□□ 0.26
Cpne4Q8BLR2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne4Q8BLR2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne4Q8BLR2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Cpne4Q8BLR2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne4Q8BLR2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Cpne4Q8BLR2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne4Q8BLR2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne4Q8BLR2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne4Q8BLR2 Gm12933-201ENSMUST00000120203 872 ntBASIC16.69■□□□□ 0.26
Cpne4Q8BLR2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.69■□□□□ 0.26
Cpne4Q8BLR2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne4Q8BLR2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.69■□□□□ 0.26
Cpne4Q8BLR2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne4Q8BLR2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne4Q8BLR2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne4Q8BLR2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne4Q8BLR2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne4Q8BLR2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Cpne4Q8BLR2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Cpne4Q8BLR2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne4Q8BLR2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne4Q8BLR2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne4Q8BLR2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne4Q8BLR2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms