Protein–RNA interactions for Protein: Q8BK63

Csnk1a1, Casein kinase I isoform alpha, mousemouse

Known RBP Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1a1Q8BK63 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Csnk1a1Q8BK63 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Csnk1a1Q8BK63 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Csnk1a1Q8BK63 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Csnk1a1Q8BK63 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Csnk1a1Q8BK63 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Csnk1a1Q8BK63 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Csnk1a1Q8BK63 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Csnk1a1Q8BK63 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Csnk1a1Q8BK63 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Csnk1a1Q8BK63 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.66■□□□□ 0.26
Csnk1a1Q8BK63 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.66■□□□□ 0.26
Csnk1a1Q8BK63 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Csnk1a1Q8BK63 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Csnk1a1Q8BK63 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Csnk1a1Q8BK63 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Csnk1a1Q8BK63 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Csnk1a1Q8BK63 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Csnk1a1Q8BK63 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Csnk1a1Q8BK63 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Csnk1a1Q8BK63 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Csnk1a1Q8BK63 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.65■□□□□ 0.26
Csnk1a1Q8BK63 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Csnk1a1Q8BK63 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Csnk1a1Q8BK63 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Csnk1a1Q8BK63 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Csnk1a1Q8BK63 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.65■□□□□ 0.26
Csnk1a1Q8BK63 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.65■□□□□ 0.26
Csnk1a1Q8BK63 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.65■□□□□ 0.26
Csnk1a1Q8BK63 Gm42778-201ENSMUST00000199644 553 ntBASIC16.65■□□□□ 0.26
Csnk1a1Q8BK63 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.65■□□□□ 0.26
Csnk1a1Q8BK63 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Csnk1a1Q8BK63 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Csnk1a1Q8BK63 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Csnk1a1Q8BK63 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Csnk1a1Q8BK63 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Csnk1a1Q8BK63 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Csnk1a1Q8BK63 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.65■□□□□ 0.26
Csnk1a1Q8BK63 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
Csnk1a1Q8BK63 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Csnk1a1Q8BK63 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Csnk1a1Q8BK63 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Csnk1a1Q8BK63 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Csnk1a1Q8BK63 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Csnk1a1Q8BK63 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Csnk1a1Q8BK63 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Csnk1a1Q8BK63 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Csnk1a1Q8BK63 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Csnk1a1Q8BK63 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
Csnk1a1Q8BK63 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Csnk1a1Q8BK63 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Csnk1a1Q8BK63 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.64■□□□□ 0.25
Csnk1a1Q8BK63 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.64■□□□□ 0.25
Csnk1a1Q8BK63 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Csnk1a1Q8BK63 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Csnk1a1Q8BK63 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Csnk1a1Q8BK63 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Csnk1a1Q8BK63 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Csnk1a1Q8BK63 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Csnk1a1Q8BK63 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Csnk1a1Q8BK63 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Csnk1a1Q8BK63 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Csnk1a1Q8BK63 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Csnk1a1Q8BK63 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Csnk1a1Q8BK63 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.63■□□□□ 0.25
Csnk1a1Q8BK63 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Csnk1a1Q8BK63 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Csnk1a1Q8BK63 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Csnk1a1Q8BK63 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Csnk1a1Q8BK63 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Csnk1a1Q8BK63 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Csnk1a1Q8BK63 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Csnk1a1Q8BK63 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Csnk1a1Q8BK63 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Csnk1a1Q8BK63 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Csnk1a1Q8BK63 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Csnk1a1Q8BK63 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Csnk1a1Q8BK63 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Csnk1a1Q8BK63 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Csnk1a1Q8BK63 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Csnk1a1Q8BK63 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Csnk1a1Q8BK63 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Csnk1a1Q8BK63 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Csnk1a1Q8BK63 Gm13234-201ENSMUST00000120010 747 ntBASIC16.62■□□□□ 0.25
Csnk1a1Q8BK63 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Csnk1a1Q8BK63 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.62■□□□□ 0.25
Csnk1a1Q8BK63 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.62■□□□□ 0.25
Csnk1a1Q8BK63 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Csnk1a1Q8BK63 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Csnk1a1Q8BK63 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Csnk1a1Q8BK63 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Csnk1a1Q8BK63 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Csnk1a1Q8BK63 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Csnk1a1Q8BK63 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Csnk1a1Q8BK63 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Csnk1a1Q8BK63 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Csnk1a1Q8BK63 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Csnk1a1Q8BK63 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Csnk1a1Q8BK63 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Csnk1a1Q8BK63 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms