Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp1Q8BJQ2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp1Q8BJQ2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Usp1Q8BJQ2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp1Q8BJQ2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp1Q8BJQ2 Gm10252-201ENSMUST00000209541 832 ntBASIC19.89■□□□□ 0.77
Usp1Q8BJQ2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp1Q8BJQ2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp1Q8BJQ2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp1Q8BJQ2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Usp1Q8BJQ2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp1Q8BJQ2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp1Q8BJQ2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Usp1Q8BJQ2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp1Q8BJQ2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp1Q8BJQ2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.88■□□□□ 0.77
Usp1Q8BJQ2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp1Q8BJQ2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp1Q8BJQ2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Usp1Q8BJQ2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp1Q8BJQ2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp1Q8BJQ2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Usp1Q8BJQ2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Usp1Q8BJQ2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.88■□□□□ 0.77
Usp1Q8BJQ2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Usp1Q8BJQ2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp1Q8BJQ2 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.88■□□□□ 0.77
Usp1Q8BJQ2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp1Q8BJQ2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp1Q8BJQ2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp1Q8BJQ2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp1Q8BJQ2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Usp1Q8BJQ2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.87■□□□□ 0.77
Usp1Q8BJQ2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp1Q8BJQ2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp1Q8BJQ2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp1Q8BJQ2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.87■□□□□ 0.77
Usp1Q8BJQ2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp1Q8BJQ2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp1Q8BJQ2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp1Q8BJQ2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usp1Q8BJQ2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp1Q8BJQ2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usp1Q8BJQ2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp1Q8BJQ2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp1Q8BJQ2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Usp1Q8BJQ2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp1Q8BJQ2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Usp1Q8BJQ2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp1Q8BJQ2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp1Q8BJQ2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Usp1Q8BJQ2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
Usp1Q8BJQ2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.86■□□□□ 0.77
Usp1Q8BJQ2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp1Q8BJQ2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.86■□□□□ 0.77
Usp1Q8BJQ2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp1Q8BJQ2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp1Q8BJQ2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Usp1Q8BJQ2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp1Q8BJQ2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Usp1Q8BJQ2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp1Q8BJQ2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp1Q8BJQ2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp1Q8BJQ2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp1Q8BJQ2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Usp1Q8BJQ2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp1Q8BJQ2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.85■□□□□ 0.77
Usp1Q8BJQ2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.85■□□□□ 0.77
Usp1Q8BJQ2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Usp1Q8BJQ2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Usp1Q8BJQ2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp1Q8BJQ2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp1Q8BJQ2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Usp1Q8BJQ2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.84■□□□□ 0.77
Usp1Q8BJQ2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Usp1Q8BJQ2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp1Q8BJQ2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp1Q8BJQ2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Usp1Q8BJQ2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.84■□□□□ 0.77
Usp1Q8BJQ2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.84■□□□□ 0.77
Usp1Q8BJQ2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp1Q8BJQ2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.84■□□□□ 0.77
Usp1Q8BJQ2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp1Q8BJQ2 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.84■□□□□ 0.77
Usp1Q8BJQ2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp1Q8BJQ2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
Usp1Q8BJQ2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
Usp1Q8BJQ2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp1Q8BJQ2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp1Q8BJQ2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Usp1Q8BJQ2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Usp1Q8BJQ2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Usp1Q8BJQ2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp1Q8BJQ2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp1Q8BJQ2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp1Q8BJQ2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Usp1Q8BJQ2 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.82■□□□□ 0.76
Usp1Q8BJQ2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Usp1Q8BJQ2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Usp1Q8BJQ2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms