Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atpaf1Q811I0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atpaf1Q811I0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atpaf1Q811I0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atpaf1Q811I0 Mir6538-201ENSMUST00000183713 110 ntBASIC15.32■□□□□ 0.04
Atpaf1Q811I0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Atpaf1Q811I0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC15.32■□□□□ 0.04
Atpaf1Q811I0 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.32■□□□□ 0.04
Atpaf1Q811I0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atpaf1Q811I0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atpaf1Q811I0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atpaf1Q811I0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Atpaf1Q811I0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atpaf1Q811I0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atpaf1Q811I0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atpaf1Q811I0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atpaf1Q811I0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Atpaf1Q811I0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atpaf1Q811I0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atpaf1Q811I0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atpaf1Q811I0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atpaf1Q811I0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atpaf1Q811I0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atpaf1Q811I0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atpaf1Q811I0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atpaf1Q811I0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Atpaf1Q811I0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atpaf1Q811I0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atpaf1Q811I0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atpaf1Q811I0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atpaf1Q811I0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Atpaf1Q811I0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atpaf1Q811I0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atpaf1Q811I0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Atpaf1Q811I0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atpaf1Q811I0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atpaf1Q811I0 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.31■□□□□ 0.04
Atpaf1Q811I0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atpaf1Q811I0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atpaf1Q811I0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.31■□□□□ 0.04
Atpaf1Q811I0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.3■□□□□ 0.04
Atpaf1Q811I0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atpaf1Q811I0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Atpaf1Q811I0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Atpaf1Q811I0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atpaf1Q811I0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Atpaf1Q811I0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.3■□□□□ 0.04
Atpaf1Q811I0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atpaf1Q811I0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Atpaf1Q811I0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
Atpaf1Q811I0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atpaf1Q811I0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Atpaf1Q811I0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.3■□□□□ 0.04
Atpaf1Q811I0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atpaf1Q811I0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atpaf1Q811I0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atpaf1Q811I0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atpaf1Q811I0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atpaf1Q811I0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atpaf1Q811I0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atpaf1Q811I0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atpaf1Q811I0 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.29■□□□□ 0.04
Atpaf1Q811I0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atpaf1Q811I0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Atpaf1Q811I0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC15.29■□□□□ 0.04
Atpaf1Q811I0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atpaf1Q811I0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atpaf1Q811I0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC15.29■□□□□ 0.04
Atpaf1Q811I0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atpaf1Q811I0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atpaf1Q811I0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atpaf1Q811I0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atpaf1Q811I0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Atpaf1Q811I0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.29■□□□□ 0.04
Atpaf1Q811I0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atpaf1Q811I0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf1Q811I0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf1Q811I0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf1Q811I0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf1Q811I0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf1Q811I0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.28■□□□□ 0.04
Atpaf1Q811I0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Atpaf1Q811I0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf1Q811I0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf1Q811I0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Atpaf1Q811I0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf1Q811I0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC15.28■□□□□ 0.04
Atpaf1Q811I0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.28■□□□□ 0.04
Atpaf1Q811I0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf1Q811I0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf1Q811I0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf1Q811I0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf1Q811I0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf1Q811I0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf1Q811I0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf1Q811I0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.28■□□□□ 0.04
Atpaf1Q811I0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Atpaf1Q811I0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf1Q811I0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atpaf1Q811I0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms