Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trnp1Q80ZI1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Trnp1Q80ZI1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trnp1Q80ZI1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC21.33■■□□□ 1.01
Trnp1Q80ZI1 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trnp1Q80ZI1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Trnp1Q80ZI1 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trnp1Q80ZI1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Trnp1Q80ZI1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trnp1Q80ZI1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trnp1Q80ZI1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.32■■□□□ 1
Trnp1Q80ZI1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Trnp1Q80ZI1 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trnp1Q80ZI1 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trnp1Q80ZI1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trnp1Q80ZI1 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC21.32■■□□□ 1
Trnp1Q80ZI1 Gm30025-201ENSMUST00000218555 728 ntBASIC21.32■■□□□ 1
Trnp1Q80ZI1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trnp1Q80ZI1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Trnp1Q80ZI1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trnp1Q80ZI1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trnp1Q80ZI1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Trnp1Q80ZI1 Gm21362-201ENSMUST00000194272 928 ntBASIC21.31■■□□□ 1
Trnp1Q80ZI1 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC21.31■■□□□ 1
Trnp1Q80ZI1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC21.31■■□□□ 1
Trnp1Q80ZI1 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Trnp1Q80ZI1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trnp1Q80ZI1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trnp1Q80ZI1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trnp1Q80ZI1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trnp1Q80ZI1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.3■■□□□ 1
Trnp1Q80ZI1 Gm43183-201ENSMUST00000200632 547 ntBASIC21.3■■□□□ 1
Trnp1Q80ZI1 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC21.3■■□□□ 1
Trnp1Q80ZI1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trnp1Q80ZI1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trnp1Q80ZI1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trnp1Q80ZI1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Trnp1Q80ZI1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Trnp1Q80ZI1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Trnp1Q80ZI1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trnp1Q80ZI1 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC21.29■■□□□ 1
Trnp1Q80ZI1 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.29■■□□□ 1
Trnp1Q80ZI1 Arhgef4-208ENSMUST00000211073 171 ntBASIC21.29■■□□□ 1
Trnp1Q80ZI1 Gm10819-201ENSMUST00000099988 561 ntBASIC21.29■■□□□ 1
Trnp1Q80ZI1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trnp1Q80ZI1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trnp1Q80ZI1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trnp1Q80ZI1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trnp1Q80ZI1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Trnp1Q80ZI1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trnp1Q80ZI1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trnp1Q80ZI1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trnp1Q80ZI1 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trnp1Q80ZI1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.28■■□□□ 1
Trnp1Q80ZI1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trnp1Q80ZI1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Trnp1Q80ZI1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trnp1Q80ZI1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trnp1Q80ZI1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trnp1Q80ZI1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Trnp1Q80ZI1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trnp1Q80ZI1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Trnp1Q80ZI1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trnp1Q80ZI1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Trnp1Q80ZI1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.27■□□□□ 0.99
Trnp1Q80ZI1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trnp1Q80ZI1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.26■□□□□ 0.99
Trnp1Q80ZI1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trnp1Q80ZI1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trnp1Q80ZI1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trnp1Q80ZI1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trnp1Q80ZI1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trnp1Q80ZI1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trnp1Q80ZI1 Gm13559-201ENSMUST00000120476 863 ntBASIC21.26■□□□□ 0.99
Trnp1Q80ZI1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trnp1Q80ZI1 Gm16042-201ENSMUST00000204813 1247 ntBASIC21.26■□□□□ 0.99
Trnp1Q80ZI1 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trnp1Q80ZI1 Mtag2-201ENSMUST00000058665 714 ntBASIC21.26■□□□□ 0.99
Trnp1Q80ZI1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trnp1Q80ZI1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trnp1Q80ZI1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trnp1Q80ZI1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trnp1Q80ZI1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Trnp1Q80ZI1 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC21.25■□□□□ 0.99
Trnp1Q80ZI1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trnp1Q80ZI1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trnp1Q80ZI1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trnp1Q80ZI1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
Trnp1Q80ZI1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.25■□□□□ 0.99
Trnp1Q80ZI1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trnp1Q80ZI1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.24■□□□□ 0.99
Trnp1Q80ZI1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trnp1Q80ZI1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trnp1Q80ZI1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trnp1Q80ZI1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trnp1Q80ZI1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.24■□□□□ 0.99
Trnp1Q80ZI1 Gm10459-201ENSMUST00000202708 1155 ntBASIC21.24■□□□□ 0.99
Trnp1Q80ZI1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC21.24■□□□□ 0.99
Trnp1Q80ZI1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC21.24■□□□□ 0.99
Trnp1Q80ZI1 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms