Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.52■□□□□ 0.72
Srrm3Q80WV7 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Srrm3Q80WV7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Srrm3Q80WV7 Gm26571-201ENSMUST00000181399 666 ntBASIC19.52■□□□□ 0.72
Srrm3Q80WV7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Srrm3Q80WV7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Srrm3Q80WV7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Srrm3Q80WV7 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Srrm3Q80WV7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Srrm3Q80WV7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.52■□□□□ 0.71
Srrm3Q80WV7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Srrm3Q80WV7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Srrm3Q80WV7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Srrm3Q80WV7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Srrm3Q80WV7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Srrm3Q80WV7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Srrm3Q80WV7 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Srrm3Q80WV7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.51■□□□□ 0.71
Srrm3Q80WV7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Srrm3Q80WV7 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.51■□□□□ 0.71
Srrm3Q80WV7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Srrm3Q80WV7 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
Srrm3Q80WV7 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.51■□□□□ 0.71
Srrm3Q80WV7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Srrm3Q80WV7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Srrm3Q80WV7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Srrm3Q80WV7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Srrm3Q80WV7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Srrm3Q80WV7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Srrm3Q80WV7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Srrm3Q80WV7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.5■□□□□ 0.71
Srrm3Q80WV7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Srrm3Q80WV7 Gm27405-201ENSMUST00000184201 112 ntBASIC19.5■□□□□ 0.71
Srrm3Q80WV7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Srrm3Q80WV7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Srrm3Q80WV7 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Srrm3Q80WV7 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Srrm3Q80WV7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Srrm3Q80WV7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Srrm3Q80WV7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Srrm3Q80WV7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Srrm3Q80WV7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Srrm3Q80WV7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.49■□□□□ 0.71
Srrm3Q80WV7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.49■□□□□ 0.71
Srrm3Q80WV7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Srrm3Q80WV7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Srrm3Q80WV7 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.49■□□□□ 0.71
Srrm3Q80WV7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Srrm3Q80WV7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Srrm3Q80WV7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Srrm3Q80WV7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Srrm3Q80WV7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Srrm3Q80WV7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Srrm3Q80WV7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Srrm3Q80WV7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Srrm3Q80WV7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Srrm3Q80WV7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Srrm3Q80WV7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Srrm3Q80WV7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Srrm3Q80WV7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Srrm3Q80WV7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Srrm3Q80WV7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Srrm3Q80WV7 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Srrm3Q80WV7 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Srrm3Q80WV7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Srrm3Q80WV7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Srrm3Q80WV7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Srrm3Q80WV7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Srrm3Q80WV7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Srrm3Q80WV7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Srrm3Q80WV7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Srrm3Q80WV7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Srrm3Q80WV7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.47■□□□□ 0.71
Srrm3Q80WV7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.47■□□□□ 0.71
Srrm3Q80WV7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Srrm3Q80WV7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Srrm3Q80WV7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.47■□□□□ 0.71
Srrm3Q80WV7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Srrm3Q80WV7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Srrm3Q80WV7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Srrm3Q80WV7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Srrm3Q80WV7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Srrm3Q80WV7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Srrm3Q80WV7 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Srrm3Q80WV7 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Srrm3Q80WV7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Srrm3Q80WV7 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Srrm3Q80WV7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.46■□□□□ 0.71
Srrm3Q80WV7 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Srrm3Q80WV7 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Srrm3Q80WV7 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Srrm3Q80WV7 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Srrm3Q80WV7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Srrm3Q80WV7 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Srrm3Q80WV7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Srrm3Q80WV7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Srrm3Q80WV7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Srrm3Q80WV7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.45■□□□□ 0.7
Srrm3Q80WV7 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Srrm3Q80WV7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms