Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.8■□□□□ 0.6
Rpp38Q80UU2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpp38Q80UU2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpp38Q80UU2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rpp38Q80UU2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpp38Q80UU2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rpp38Q80UU2 Gm8495-201ENSMUST00000188740 694 ntBASIC18.79■□□□□ 0.6
Rpp38Q80UU2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rpp38Q80UU2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rpp38Q80UU2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpp38Q80UU2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpp38Q80UU2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Rpp38Q80UU2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpp38Q80UU2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpp38Q80UU2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpp38Q80UU2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rpp38Q80UU2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpp38Q80UU2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rpp38Q80UU2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpp38Q80UU2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpp38Q80UU2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpp38Q80UU2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rpp38Q80UU2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpp38Q80UU2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rpp38Q80UU2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rpp38Q80UU2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rpp38Q80UU2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.78■□□□□ 0.6
Rpp38Q80UU2 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.78■□□□□ 0.6
Rpp38Q80UU2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpp38Q80UU2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpp38Q80UU2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpp38Q80UU2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpp38Q80UU2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpp38Q80UU2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpp38Q80UU2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpp38Q80UU2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpp38Q80UU2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpp38Q80UU2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpp38Q80UU2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpp38Q80UU2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.77■□□□□ 0.6
Rpp38Q80UU2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpp38Q80UU2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Rpp38Q80UU2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rpp38Q80UU2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rpp38Q80UU2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Rpp38Q80UU2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpp38Q80UU2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpp38Q80UU2 Gm10849-201ENSMUST00000100397 618 ntBASIC18.77■□□□□ 0.6
Rpp38Q80UU2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpp38Q80UU2 AV356131-201ENSMUST00000206201 750 ntBASIC18.77■□□□□ 0.6
Rpp38Q80UU2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rpp38Q80UU2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpp38Q80UU2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpp38Q80UU2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpp38Q80UU2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Rpp38Q80UU2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rpp38Q80UU2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rpp38Q80UU2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rpp38Q80UU2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Rpp38Q80UU2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rpp38Q80UU2 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.77■□□□□ 0.59
Rpp38Q80UU2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.77■□□□□ 0.59
Rpp38Q80UU2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rpp38Q80UU2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rpp38Q80UU2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Rpp38Q80UU2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rpp38Q80UU2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Rpp38Q80UU2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rpp38Q80UU2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.76■□□□□ 0.59
Rpp38Q80UU2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpp38Q80UU2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpp38Q80UU2 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.76■□□□□ 0.59
Rpp38Q80UU2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpp38Q80UU2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpp38Q80UU2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpp38Q80UU2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rpp38Q80UU2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpp38Q80UU2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.76■□□□□ 0.59
Rpp38Q80UU2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpp38Q80UU2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpp38Q80UU2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpp38Q80UU2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpp38Q80UU2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Rpp38Q80UU2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.75■□□□□ 0.59
Rpp38Q80UU2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Rpp38Q80UU2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpp38Q80UU2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpp38Q80UU2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpp38Q80UU2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpp38Q80UU2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Rpp38Q80UU2 Gm7514-201ENSMUST00000209475 934 ntBASIC18.75■□□□□ 0.59
Rpp38Q80UU2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Rpp38Q80UU2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rpp38Q80UU2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpp38Q80UU2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpp38Q80UU2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpp38Q80UU2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.74■□□□□ 0.59
Rpp38Q80UU2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rpp38Q80UU2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rpp38Q80UU2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms