Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh19Q80TF3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh19Q80TF3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh19Q80TF3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh19Q80TF3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdh19Q80TF3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh19Q80TF3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh19Q80TF3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh19Q80TF3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh19Q80TF3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Pcdh19Q80TF3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.4■□□□□ 0.54
Pcdh19Q80TF3 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh19Q80TF3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh19Q80TF3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh19Q80TF3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh19Q80TF3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pcdh19Q80TF3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Pcdh19Q80TF3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh19Q80TF3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdh19Q80TF3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdh19Q80TF3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.39■□□□□ 0.54
Pcdh19Q80TF3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdh19Q80TF3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh19Q80TF3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh19Q80TF3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh19Q80TF3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh19Q80TF3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdh19Q80TF3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.39■□□□□ 0.53
Pcdh19Q80TF3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.39■□□□□ 0.53
Pcdh19Q80TF3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.39■□□□□ 0.53
Pcdh19Q80TF3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Pcdh19Q80TF3 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.39■□□□□ 0.53
Pcdh19Q80TF3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh19Q80TF3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh19Q80TF3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh19Q80TF3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Pcdh19Q80TF3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Pcdh19Q80TF3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh19Q80TF3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdh19Q80TF3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh19Q80TF3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pcdh19Q80TF3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh19Q80TF3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Pcdh19Q80TF3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Pcdh19Q80TF3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Pcdh19Q80TF3 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.38■□□□□ 0.53
Pcdh19Q80TF3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.38■□□□□ 0.53
Pcdh19Q80TF3 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh19Q80TF3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh19Q80TF3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pcdh19Q80TF3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pcdh19Q80TF3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh19Q80TF3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh19Q80TF3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh19Q80TF3 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.38■□□□□ 0.53
Pcdh19Q80TF3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh19Q80TF3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
Pcdh19Q80TF3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh19Q80TF3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh19Q80TF3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Pcdh19Q80TF3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdh19Q80TF3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh19Q80TF3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh19Q80TF3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Pcdh19Q80TF3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh19Q80TF3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Pcdh19Q80TF3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh19Q80TF3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Pcdh19Q80TF3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh19Q80TF3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh19Q80TF3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Pcdh19Q80TF3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh19Q80TF3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh19Q80TF3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh19Q80TF3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh19Q80TF3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh19Q80TF3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh19Q80TF3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh19Q80TF3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh19Q80TF3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh19Q80TF3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh19Q80TF3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh19Q80TF3 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.35■□□□□ 0.53
Pcdh19Q80TF3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh19Q80TF3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Pcdh19Q80TF3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.35■□□□□ 0.53
Pcdh19Q80TF3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.35■□□□□ 0.53
Pcdh19Q80TF3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh19Q80TF3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcdh19Q80TF3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcdh19Q80TF3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh19Q80TF3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Pcdh19Q80TF3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh19Q80TF3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh19Q80TF3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh19Q80TF3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh19Q80TF3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh19Q80TF3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh19Q80TF3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh19Q80TF3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms