Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.7■□□□□ 0.42
Trim45Q6PFY8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim45Q6PFY8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim45Q6PFY8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim45Q6PFY8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trim45Q6PFY8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.7■□□□□ 0.42
Trim45Q6PFY8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trim45Q6PFY8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trim45Q6PFY8 Gm37179-201ENSMUST00000194862 823 ntBASIC17.7■□□□□ 0.42
Trim45Q6PFY8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim45Q6PFY8 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.7■□□□□ 0.42
Trim45Q6PFY8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim45Q6PFY8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim45Q6PFY8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Trim45Q6PFY8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim45Q6PFY8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Trim45Q6PFY8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim45Q6PFY8 AA386476-201ENSMUST00000098781 1665 ntBASIC17.7■□□□□ 0.42
Trim45Q6PFY8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim45Q6PFY8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Trim45Q6PFY8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trim45Q6PFY8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim45Q6PFY8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim45Q6PFY8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.7■□□□□ 0.42
Trim45Q6PFY8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Trim45Q6PFY8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim45Q6PFY8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim45Q6PFY8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim45Q6PFY8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.69■□□□□ 0.42
Trim45Q6PFY8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.69■□□□□ 0.42
Trim45Q6PFY8 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim45Q6PFY8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim45Q6PFY8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim45Q6PFY8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim45Q6PFY8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim45Q6PFY8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim45Q6PFY8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim45Q6PFY8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim45Q6PFY8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim45Q6PFY8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim45Q6PFY8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
Trim45Q6PFY8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim45Q6PFY8 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim45Q6PFY8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim45Q6PFY8 Reep4-203ENSMUST00000226563 1444 ntBASIC17.68■□□□□ 0.42
Trim45Q6PFY8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim45Q6PFY8 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim45Q6PFY8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Trim45Q6PFY8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim45Q6PFY8 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.68■□□□□ 0.42
Trim45Q6PFY8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim45Q6PFY8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim45Q6PFY8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim45Q6PFY8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim45Q6PFY8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim45Q6PFY8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trim45Q6PFY8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim45Q6PFY8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim45Q6PFY8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim45Q6PFY8 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim45Q6PFY8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim45Q6PFY8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim45Q6PFY8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim45Q6PFY8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim45Q6PFY8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim45Q6PFY8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim45Q6PFY8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim45Q6PFY8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim45Q6PFY8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim45Q6PFY8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.66■□□□□ 0.42
Trim45Q6PFY8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim45Q6PFY8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trim45Q6PFY8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim45Q6PFY8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim45Q6PFY8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim45Q6PFY8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim45Q6PFY8 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.66■□□□□ 0.42
Trim45Q6PFY8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim45Q6PFY8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim45Q6PFY8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trim45Q6PFY8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim45Q6PFY8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim45Q6PFY8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim45Q6PFY8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim45Q6PFY8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim45Q6PFY8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim45Q6PFY8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trim45Q6PFY8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim45Q6PFY8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim45Q6PFY8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim45Q6PFY8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim45Q6PFY8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim45Q6PFY8 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
Trim45Q6PFY8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim45Q6PFY8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim45Q6PFY8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim45Q6PFY8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim45Q6PFY8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim45Q6PFY8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim45Q6PFY8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms