Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf220Q6PDX6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf220Q6PDX6 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf220Q6PDX6 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf220Q6PDX6 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf220Q6PDX6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf220Q6PDX6 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf220Q6PDX6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf220Q6PDX6 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rnf220Q6PDX6 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf220Q6PDX6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.71■□□□□ 0.43
Rnf220Q6PDX6 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf220Q6PDX6 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf220Q6PDX6 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.71■□□□□ 0.43
Rnf220Q6PDX6 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf220Q6PDX6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf220Q6PDX6 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf220Q6PDX6 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.71■□□□□ 0.42
Rnf220Q6PDX6 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Rnf220Q6PDX6 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rnf220Q6PDX6 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf220Q6PDX6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf220Q6PDX6 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf220Q6PDX6 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf220Q6PDX6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf220Q6PDX6 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rnf220Q6PDX6 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rnf220Q6PDX6 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.7■□□□□ 0.42
Rnf220Q6PDX6 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf220Q6PDX6 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rnf220Q6PDX6 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf220Q6PDX6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf220Q6PDX6 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.7■□□□□ 0.42
Rnf220Q6PDX6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf220Q6PDX6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf220Q6PDX6 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Rnf220Q6PDX6 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rnf220Q6PDX6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf220Q6PDX6 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf220Q6PDX6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.69■□□□□ 0.42
Rnf220Q6PDX6 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.69■□□□□ 0.42
Rnf220Q6PDX6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rnf220Q6PDX6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Rnf220Q6PDX6 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf220Q6PDX6 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf220Q6PDX6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf220Q6PDX6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf220Q6PDX6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf220Q6PDX6 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rnf220Q6PDX6 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
Rnf220Q6PDX6 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.68■□□□□ 0.42
Rnf220Q6PDX6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.68■□□□□ 0.42
Rnf220Q6PDX6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf220Q6PDX6 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rnf220Q6PDX6 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rnf220Q6PDX6 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf220Q6PDX6 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf220Q6PDX6 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf220Q6PDX6 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf220Q6PDX6 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.67■□□□□ 0.42
Rnf220Q6PDX6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf220Q6PDX6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.67■□□□□ 0.42
Rnf220Q6PDX6 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf220Q6PDX6 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf220Q6PDX6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf220Q6PDX6 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf220Q6PDX6 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf220Q6PDX6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf220Q6PDX6 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf220Q6PDX6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Rnf220Q6PDX6 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf220Q6PDX6 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf220Q6PDX6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.66■□□□□ 0.42
Rnf220Q6PDX6 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf220Q6PDX6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.66■□□□□ 0.42
Rnf220Q6PDX6 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf220Q6PDX6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rnf220Q6PDX6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.66■□□□□ 0.42
Rnf220Q6PDX6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Rnf220Q6PDX6 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf220Q6PDX6 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf220Q6PDX6 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Rnf220Q6PDX6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf220Q6PDX6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf220Q6PDX6 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rnf220Q6PDX6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf220Q6PDX6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf220Q6PDX6 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.65■□□□□ 0.42
Rnf220Q6PDX6 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf220Q6PDX6 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf220Q6PDX6 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rnf220Q6PDX6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf220Q6PDX6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf220Q6PDX6 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf220Q6PDX6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf220Q6PDX6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rnf220Q6PDX6 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf220Q6PDX6 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.65■□□□□ 0.42
Rnf220Q6PDX6 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
Rnf220Q6PDX6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms