Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Krt39Q6IFX4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Krt39Q6IFX4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Krt39Q6IFX4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Krt39Q6IFX4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Krt39Q6IFX4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Krt39Q6IFX4 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.69■□□□□ 0.9
Krt39Q6IFX4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Krt39Q6IFX4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt39Q6IFX4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt39Q6IFX4 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt39Q6IFX4 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt39Q6IFX4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt39Q6IFX4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt39Q6IFX4 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Krt39Q6IFX4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt39Q6IFX4 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Krt39Q6IFX4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt39Q6IFX4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt39Q6IFX4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt39Q6IFX4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt39Q6IFX4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Krt39Q6IFX4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt39Q6IFX4 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Krt39Q6IFX4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Krt39Q6IFX4 Gm7860-201ENSMUST00000121190 879 ntBASIC20.68■□□□□ 0.9
Krt39Q6IFX4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt39Q6IFX4 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Krt39Q6IFX4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt39Q6IFX4 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt39Q6IFX4 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.68■□□□□ 0.9
Krt39Q6IFX4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt39Q6IFX4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.68■□□□□ 0.9
Krt39Q6IFX4 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt39Q6IFX4 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Krt39Q6IFX4 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Krt39Q6IFX4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Krt39Q6IFX4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Krt39Q6IFX4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Krt39Q6IFX4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Krt39Q6IFX4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Krt39Q6IFX4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.67■□□□□ 0.9
Krt39Q6IFX4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Krt39Q6IFX4 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Krt39Q6IFX4 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.67■□□□□ 0.9
Krt39Q6IFX4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Krt39Q6IFX4 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Krt39Q6IFX4 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Krt39Q6IFX4 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.66■□□□□ 0.9
Krt39Q6IFX4 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Krt39Q6IFX4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Krt39Q6IFX4 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Krt39Q6IFX4 Smad6-203ENSMUST00000179458 273 ntBASIC20.66■□□□□ 0.9
Krt39Q6IFX4 Mir7075-201ENSMUST00000184187 82 ntBASIC20.66■□□□□ 0.9
Krt39Q6IFX4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.66■□□□□ 0.9
Krt39Q6IFX4 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Krt39Q6IFX4 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.66■□□□□ 0.9
Krt39Q6IFX4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Krt39Q6IFX4 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Krt39Q6IFX4 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Krt39Q6IFX4 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Krt39Q6IFX4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Krt39Q6IFX4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Krt39Q6IFX4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Krt39Q6IFX4 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Krt39Q6IFX4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Krt39Q6IFX4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Krt39Q6IFX4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt39Q6IFX4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Krt39Q6IFX4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.65■□□□□ 0.9
Krt39Q6IFX4 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt39Q6IFX4 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.65■□□□□ 0.9
Krt39Q6IFX4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt39Q6IFX4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Krt39Q6IFX4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt39Q6IFX4 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt39Q6IFX4 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt39Q6IFX4 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt39Q6IFX4 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Krt39Q6IFX4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Krt39Q6IFX4 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Krt39Q6IFX4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Krt39Q6IFX4 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Krt39Q6IFX4 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Krt39Q6IFX4 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Krt39Q6IFX4 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Krt39Q6IFX4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Krt39Q6IFX4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Krt39Q6IFX4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Krt39Q6IFX4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Krt39Q6IFX4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Krt39Q6IFX4 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Krt39Q6IFX4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Krt39Q6IFX4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Krt39Q6IFX4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Krt39Q6IFX4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Krt39Q6IFX4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Krt39Q6IFX4 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Krt39Q6IFX4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Krt39Q6IFX4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms