Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga7Q6DD96 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga7Q6DD96 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga7Q6DD96 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhga7Q6DD96 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhga7Q6DD96 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga7Q6DD96 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Pcdhga7Q6DD96 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga7Q6DD96 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga7Q6DD96 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga7Q6DD96 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Pcdhga7Q6DD96 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga7Q6DD96 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga7Q6DD96 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga7Q6DD96 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga7Q6DD96 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pcdhga7Q6DD96 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pcdhga7Q6DD96 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.16■□□□□ 0.5
Pcdhga7Q6DD96 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga7Q6DD96 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga7Q6DD96 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga7Q6DD96 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Pcdhga7Q6DD96 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga7Q6DD96 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga7Q6DD96 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Pcdhga7Q6DD96 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga7Q6DD96 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.15■□□□□ 0.5
Pcdhga7Q6DD96 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.15■□□□□ 0.5
Pcdhga7Q6DD96 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Pcdhga7Q6DD96 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga7Q6DD96 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga7Q6DD96 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga7Q6DD96 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.15■□□□□ 0.5
Pcdhga7Q6DD96 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga7Q6DD96 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Pcdhga7Q6DD96 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhga7Q6DD96 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhga7Q6DD96 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhga7Q6DD96 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Pcdhga7Q6DD96 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhga7Q6DD96 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhga7Q6DD96 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdhga7Q6DD96 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdhga7Q6DD96 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhga7Q6DD96 Gm7860-201ENSMUST00000121190 879 ntBASIC18.14■□□□□ 0.49
Pcdhga7Q6DD96 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Pcdhga7Q6DD96 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdhga7Q6DD96 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhga7Q6DD96 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhga7Q6DD96 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhga7Q6DD96 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhga7Q6DD96 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Pcdhga7Q6DD96 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdhga7Q6DD96 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga7Q6DD96 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga7Q6DD96 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga7Q6DD96 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Pcdhga7Q6DD96 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pcdhga7Q6DD96 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Pcdhga7Q6DD96 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga7Q6DD96 Gm27801-201ENSMUST00000184174 223 ntBASIC18.13■□□□□ 0.49
Pcdhga7Q6DD96 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.13■□□□□ 0.49
Pcdhga7Q6DD96 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.13■□□□□ 0.49
Pcdhga7Q6DD96 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga7Q6DD96 Gm6139-201ENSMUST00000079261 882 ntBASIC18.13■□□□□ 0.49
Pcdhga7Q6DD96 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga7Q6DD96 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga7Q6DD96 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga7Q6DD96 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga7Q6DD96 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga7Q6DD96 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga7Q6DD96 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga7Q6DD96 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga7Q6DD96 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.12■□□□□ 0.49
Pcdhga7Q6DD96 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.12■□□□□ 0.49
Pcdhga7Q6DD96 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga7Q6DD96 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga7Q6DD96 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcdhga7Q6DD96 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pcdhga7Q6DD96 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga7Q6DD96 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pcdhga7Q6DD96 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcdhga7Q6DD96 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Pcdhga7Q6DD96 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhga7Q6DD96 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhga7Q6DD96 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Pcdhga7Q6DD96 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
Pcdhga7Q6DD96 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhga7Q6DD96 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Pcdhga7Q6DD96 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
Pcdhga7Q6DD96 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhga7Q6DD96 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhga7Q6DD96 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdhga7Q6DD96 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhga7Q6DD96 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhga7Q6DD96 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhga7Q6DD96 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhga7Q6DD96 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhga7Q6DD96 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
Pcdhga7Q6DD96 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms