Protein–RNA interactions for Protein: Q6A026

Pds5a, Sister chromatid cohesion protein PDS5 homolog A, mousemouse

Predictions only

Length 1,332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5aQ6A026 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pds5aQ6A026 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Pds5aQ6A026 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pds5aQ6A026 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pds5aQ6A026 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pds5aQ6A026 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pds5aQ6A026 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pds5aQ6A026 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pds5aQ6A026 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pds5aQ6A026 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pds5aQ6A026 Gm7290-201ENSMUST00000104990 617 ntBASIC20.21■□□□□ 0.83
Pds5aQ6A026 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Pds5aQ6A026 Gm12918-201ENSMUST00000120234 636 ntBASIC20.21■□□□□ 0.83
Pds5aQ6A026 Gm15710-201ENSMUST00000121821 636 ntBASIC20.21■□□□□ 0.83
Pds5aQ6A026 Gm5075-201ENSMUST00000196916 622 ntBASIC20.21■□□□□ 0.83
Pds5aQ6A026 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Pds5aQ6A026 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pds5aQ6A026 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pds5aQ6A026 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.21■□□□□ 0.83
Pds5aQ6A026 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.21■□□□□ 0.83
Pds5aQ6A026 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pds5aQ6A026 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pds5aQ6A026 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pds5aQ6A026 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pds5aQ6A026 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pds5aQ6A026 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pds5aQ6A026 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pds5aQ6A026 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pds5aQ6A026 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Pds5aQ6A026 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Pds5aQ6A026 Gm6365-201ENSMUST00000054711 744 ntBASIC20.2■□□□□ 0.82
Pds5aQ6A026 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Pds5aQ6A026 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.2■□□□□ 0.82
Pds5aQ6A026 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pds5aQ6A026 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pds5aQ6A026 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pds5aQ6A026 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pds5aQ6A026 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pds5aQ6A026 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pds5aQ6A026 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Pds5aQ6A026 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pds5aQ6A026 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pds5aQ6A026 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pds5aQ6A026 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pds5aQ6A026 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Pds5aQ6A026 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pds5aQ6A026 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Pds5aQ6A026 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pds5aQ6A026 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pds5aQ6A026 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Pds5aQ6A026 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pds5aQ6A026 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pds5aQ6A026 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pds5aQ6A026 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pds5aQ6A026 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pds5aQ6A026 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pds5aQ6A026 Gm13148-201ENSMUST00000118892 745 ntBASIC20.17■□□□□ 0.82
Pds5aQ6A026 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pds5aQ6A026 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.17■□□□□ 0.82
Pds5aQ6A026 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Pds5aQ6A026 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pds5aQ6A026 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pds5aQ6A026 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pds5aQ6A026 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pds5aQ6A026 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Pds5aQ6A026 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pds5aQ6A026 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pds5aQ6A026 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pds5aQ6A026 Mir5133-201ENSMUST00000174955 77 ntBASIC20.16■□□□□ 0.82
Pds5aQ6A026 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.16■□□□□ 0.82
Pds5aQ6A026 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Pds5aQ6A026 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pds5aQ6A026 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pds5aQ6A026 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pds5aQ6A026 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pds5aQ6A026 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pds5aQ6A026 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pds5aQ6A026 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pds5aQ6A026 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pds5aQ6A026 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pds5aQ6A026 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Pds5aQ6A026 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pds5aQ6A026 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.15■□□□□ 0.82
Pds5aQ6A026 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pds5aQ6A026 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pds5aQ6A026 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pds5aQ6A026 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pds5aQ6A026 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pds5aQ6A026 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pds5aQ6A026 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.14■□□□□ 0.81
Pds5aQ6A026 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pds5aQ6A026 Gm6211-202ENSMUST00000167849 925 ntBASIC20.14■□□□□ 0.81
Pds5aQ6A026 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.14■□□□□ 0.81
Pds5aQ6A026 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pds5aQ6A026 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Pds5aQ6A026 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.14■□□□□ 0.81
Pds5aQ6A026 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pds5aQ6A026 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pds5aQ6A026 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pds5aQ6A026 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms