Protein–RNA interactions for Protein: Q62209

Sycp1, Synaptonemal complex protein 1, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sycp1Q62209 Gm42778-201ENSMUST00000199644 553 ntBASIC20.96■□□□□ 0.95
Sycp1Q62209 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.96■□□□□ 0.95
Sycp1Q62209 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Sycp1Q62209 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
Sycp1Q62209 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sycp1Q62209 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Sycp1Q62209 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sycp1Q62209 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sycp1Q62209 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sycp1Q62209 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.95■□□□□ 0.95
Sycp1Q62209 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Sycp1Q62209 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.95■□□□□ 0.95
Sycp1Q62209 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Sycp1Q62209 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sycp1Q62209 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sycp1Q62209 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sycp1Q62209 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sycp1Q62209 Gm18284-201ENSMUST00000172604 624 ntBASIC20.95■□□□□ 0.94
Sycp1Q62209 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.95■□□□□ 0.94
Sycp1Q62209 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.95■□□□□ 0.94
Sycp1Q62209 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
Sycp1Q62209 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sycp1Q62209 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sycp1Q62209 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sycp1Q62209 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Sycp1Q62209 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sycp1Q62209 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sycp1Q62209 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sycp1Q62209 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
Sycp1Q62209 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sycp1Q62209 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sycp1Q62209 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sycp1Q62209 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sycp1Q62209 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.94■□□□□ 0.94
Sycp1Q62209 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sycp1Q62209 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Sycp1Q62209 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Sycp1Q62209 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sycp1Q62209 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sycp1Q62209 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.93■□□□□ 0.94
Sycp1Q62209 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sycp1Q62209 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sycp1Q62209 Gm38205-201ENSMUST00000192243 258 ntBASIC20.93■□□□□ 0.94
Sycp1Q62209 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sycp1Q62209 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Sycp1Q62209 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sycp1Q62209 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.93■□□□□ 0.94
Sycp1Q62209 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sycp1Q62209 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Sycp1Q62209 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sycp1Q62209 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sycp1Q62209 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Sycp1Q62209 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sycp1Q62209 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sycp1Q62209 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Sycp1Q62209 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sycp1Q62209 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sycp1Q62209 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sycp1Q62209 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sycp1Q62209 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sycp1Q62209 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sycp1Q62209 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sycp1Q62209 Gm7860-201ENSMUST00000121190 879 ntBASIC20.91■□□□□ 0.94
Sycp1Q62209 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.91■□□□□ 0.94
Sycp1Q62209 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.91■□□□□ 0.94
Sycp1Q62209 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Sycp1Q62209 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Sycp1Q62209 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sycp1Q62209 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.91■□□□□ 0.94
Sycp1Q62209 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Sycp1Q62209 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.91■□□□□ 0.94
Sycp1Q62209 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.91■□□□□ 0.94
Sycp1Q62209 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sycp1Q62209 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
Sycp1Q62209 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sycp1Q62209 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.91■□□□□ 0.94
Sycp1Q62209 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sycp1Q62209 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sycp1Q62209 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Sycp1Q62209 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sycp1Q62209 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sycp1Q62209 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sycp1Q62209 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sycp1Q62209 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sycp1Q62209 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sycp1Q62209 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sycp1Q62209 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sycp1Q62209 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sycp1Q62209 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sycp1Q62209 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.9■□□□□ 0.94
Sycp1Q62209 Gm42642-201ENSMUST00000200683 355 ntBASIC20.9■□□□□ 0.94
Sycp1Q62209 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sycp1Q62209 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sycp1Q62209 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Sycp1Q62209 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Sycp1Q62209 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sycp1Q62209 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Sycp1Q62209 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sycp1Q62209 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Sycp1Q62209 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms