Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox17Q61473 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sox17Q61473 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Sox17Q61473 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox17Q61473 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox17Q61473 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox17Q61473 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox17Q61473 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sox17Q61473 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sox17Q61473 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.56■□□□□ 0.4
Sox17Q61473 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sox17Q61473 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox17Q61473 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.55■□□□□ 0.4
Sox17Q61473 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Sox17Q61473 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox17Q61473 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox17Q61473 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox17Q61473 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.55■□□□□ 0.4
Sox17Q61473 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Sox17Q61473 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox17Q61473 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sox17Q61473 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sox17Q61473 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox17Q61473 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Sox17Q61473 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sox17Q61473 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Sox17Q61473 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Sox17Q61473 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.54■□□□□ 0.4
Sox17Q61473 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox17Q61473 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.54■□□□□ 0.4
Sox17Q61473 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.54■□□□□ 0.4
Sox17Q61473 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox17Q61473 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox17Q61473 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Sox17Q61473 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.53■□□□□ 0.4
Sox17Q61473 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox17Q61473 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Sox17Q61473 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sox17Q61473 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox17Q61473 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox17Q61473 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox17Q61473 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox17Q61473 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sox17Q61473 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Sox17Q61473 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox17Q61473 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox17Q61473 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox17Q61473 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox17Q61473 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.52■□□□□ 0.4
Sox17Q61473 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox17Q61473 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
Sox17Q61473 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Sox17Q61473 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox17Q61473 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox17Q61473 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox17Q61473 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox17Q61473 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.52■□□□□ 0.4
Sox17Q61473 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.52■□□□□ 0.4
Sox17Q61473 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.52■□□□□ 0.4
Sox17Q61473 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
Sox17Q61473 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sox17Q61473 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.52■□□□□ 0.4
Sox17Q61473 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox17Q61473 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox17Q61473 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Sox17Q61473 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sox17Q61473 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sox17Q61473 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Sox17Q61473 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Sox17Q61473 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sox17Q61473 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox17Q61473 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Sox17Q61473 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Sox17Q61473 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Sox17Q61473 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox17Q61473 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sox17Q61473 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sox17Q61473 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox17Q61473 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox17Q61473 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox17Q61473 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox17Q61473 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sox17Q61473 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Sox17Q61473 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sox17Q61473 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox17Q61473 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox17Q61473 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox17Q61473 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox17Q61473 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox17Q61473 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sox17Q61473 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox17Q61473 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox17Q61473 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox17Q61473 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox17Q61473 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Sox17Q61473 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sox17Q61473 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Sox17Q61473 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sox17Q61473 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox17Q61473 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms