Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcd1Q61466 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.57■□□□□ 0.72
Smarcd1Q61466 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcd1Q61466 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcd1Q61466 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcd1Q61466 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcd1Q61466 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Smarcd1Q61466 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Smarcd1Q61466 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcd1Q61466 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcd1Q61466 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.56■□□□□ 0.72
Smarcd1Q61466 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.56■□□□□ 0.72
Smarcd1Q61466 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcd1Q61466 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.56■□□□□ 0.72
Smarcd1Q61466 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.56■□□□□ 0.72
Smarcd1Q61466 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.56■□□□□ 0.72
Smarcd1Q61466 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Smarcd1Q61466 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcd1Q61466 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcd1Q61466 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcd1Q61466 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcd1Q61466 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcd1Q61466 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Smarcd1Q61466 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcd1Q61466 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcd1Q61466 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcd1Q61466 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcd1Q61466 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcd1Q61466 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.55■□□□□ 0.72
Smarcd1Q61466 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.55■□□□□ 0.72
Smarcd1Q61466 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcd1Q61466 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcd1Q61466 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.55■□□□□ 0.72
Smarcd1Q61466 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcd1Q61466 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcd1Q61466 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcd1Q61466 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcd1Q61466 Gm5408-201ENSMUST00000197998 747 ntBASIC19.54■□□□□ 0.72
Smarcd1Q61466 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.54■□□□□ 0.72
Smarcd1Q61466 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcd1Q61466 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcd1Q61466 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcd1Q61466 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcd1Q61466 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcd1Q61466 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcd1Q61466 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcd1Q61466 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcd1Q61466 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcd1Q61466 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcd1Q61466 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Smarcd1Q61466 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcd1Q61466 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.53■□□□□ 0.72
Smarcd1Q61466 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcd1Q61466 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcd1Q61466 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcd1Q61466 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcd1Q61466 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcd1Q61466 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcd1Q61466 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcd1Q61466 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.52■□□□□ 0.72
Smarcd1Q61466 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcd1Q61466 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.52■□□□□ 0.72
Smarcd1Q61466 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcd1Q61466 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcd1Q61466 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcd1Q61466 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smarcd1Q61466 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
Smarcd1Q61466 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
Smarcd1Q61466 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcd1Q61466 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Smarcd1Q61466 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Smarcd1Q61466 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcd1Q61466 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Smarcd1Q61466 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcd1Q61466 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.51■□□□□ 0.71
Smarcd1Q61466 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcd1Q61466 Gm4968-201ENSMUST00000071458 858 ntBASIC19.51■□□□□ 0.71
Smarcd1Q61466 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcd1Q61466 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcd1Q61466 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Smarcd1Q61466 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcd1Q61466 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcd1Q61466 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcd1Q61466 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcd1Q61466 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcd1Q61466 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Smarcd1Q61466 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Smarcd1Q61466 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcd1Q61466 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.5■□□□□ 0.71
Smarcd1Q61466 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcd1Q61466 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcd1Q61466 Notumos-201ENSMUST00000151998 2659 ntBASIC19.5■□□□□ 0.71
Smarcd1Q61466 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcd1Q61466 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcd1Q61466 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.5■□□□□ 0.71
Smarcd1Q61466 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcd1Q61466 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcd1Q61466 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcd1Q61466 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcd1Q61466 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms