Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col12a1Q60847 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col12a1Q60847 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col12a1Q60847 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col12a1Q60847 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.78■□□□□ 0.6
Col12a1Q60847 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.78■□□□□ 0.6
Col12a1Q60847 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.78■□□□□ 0.6
Col12a1Q60847 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Col12a1Q60847 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.78■□□□□ 0.6
Col12a1Q60847 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Col12a1Q60847 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col12a1Q60847 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col12a1Q60847 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col12a1Q60847 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col12a1Q60847 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col12a1Q60847 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col12a1Q60847 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.77■□□□□ 0.6
Col12a1Q60847 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.77■□□□□ 0.59
Col12a1Q60847 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Col12a1Q60847 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Col12a1Q60847 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Col12a1Q60847 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col12a1Q60847 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col12a1Q60847 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col12a1Q60847 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col12a1Q60847 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Col12a1Q60847 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col12a1Q60847 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col12a1Q60847 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col12a1Q60847 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col12a1Q60847 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col12a1Q60847 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col12a1Q60847 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.76■□□□□ 0.59
Col12a1Q60847 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.76■□□□□ 0.59
Col12a1Q60847 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col12a1Q60847 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col12a1Q60847 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col12a1Q60847 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col12a1Q60847 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col12a1Q60847 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col12a1Q60847 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col12a1Q60847 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col12a1Q60847 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col12a1Q60847 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col12a1Q60847 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col12a1Q60847 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col12a1Q60847 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Col12a1Q60847 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Col12a1Q60847 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col12a1Q60847 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col12a1Q60847 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col12a1Q60847 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col12a1Q60847 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col12a1Q60847 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col12a1Q60847 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col12a1Q60847 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.74■□□□□ 0.59
Col12a1Q60847 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col12a1Q60847 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col12a1Q60847 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Col12a1Q60847 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col12a1Q60847 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col12a1Q60847 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col12a1Q60847 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col12a1Q60847 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Col12a1Q60847 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col12a1Q60847 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Col12a1Q60847 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col12a1Q60847 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col12a1Q60847 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col12a1Q60847 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col12a1Q60847 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col12a1Q60847 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col12a1Q60847 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Col12a1Q60847 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col12a1Q60847 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col12a1Q60847 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Col12a1Q60847 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.72■□□□□ 0.59
Col12a1Q60847 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Col12a1Q60847 Gm7284-201ENSMUST00000131667 944 ntBASIC18.72■□□□□ 0.59
Col12a1Q60847 Gm3375-201ENSMUST00000203929 796 ntBASIC18.72■□□□□ 0.59
Col12a1Q60847 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col12a1Q60847 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Col12a1Q60847 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col12a1Q60847 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.71■□□□□ 0.59
Col12a1Q60847 Odf3b-204ENSMUST00000227834 930 ntBASIC18.71■□□□□ 0.59
Col12a1Q60847 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col12a1Q60847 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.71■□□□□ 0.59
Col12a1Q60847 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.7■□□□□ 0.58
Col12a1Q60847 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Col12a1Q60847 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col12a1Q60847 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col12a1Q60847 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col12a1Q60847 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col12a1Q60847 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.7■□□□□ 0.58
Col12a1Q60847 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col12a1Q60847 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col12a1Q60847 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col12a1Q60847 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.69■□□□□ 0.58
Col12a1Q60847 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.69■□□□□ 0.58
Col12a1Q60847 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms