Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Xrcc1Q60596 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Xrcc1Q60596 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Xrcc1Q60596 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Xrcc1Q60596 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.9■□□□□ 0.46
Xrcc1Q60596 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Xrcc1Q60596 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Xrcc1Q60596 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Xrcc1Q60596 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Xrcc1Q60596 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Xrcc1Q60596 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Xrcc1Q60596 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Xrcc1Q60596 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Xrcc1Q60596 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.89■□□□□ 0.45
Xrcc1Q60596 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Xrcc1Q60596 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Xrcc1Q60596 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Xrcc1Q60596 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Xrcc1Q60596 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Xrcc1Q60596 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Xrcc1Q60596 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Xrcc1Q60596 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Xrcc1Q60596 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Xrcc1Q60596 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Xrcc1Q60596 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Xrcc1Q60596 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Xrcc1Q60596 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Xrcc1Q60596 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Xrcc1Q60596 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Xrcc1Q60596 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Xrcc1Q60596 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Xrcc1Q60596 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.88■□□□□ 0.45
Xrcc1Q60596 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Xrcc1Q60596 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Xrcc1Q60596 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Xrcc1Q60596 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Xrcc1Q60596 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Xrcc1Q60596 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Xrcc1Q60596 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Xrcc1Q60596 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.88■□□□□ 0.45
Xrcc1Q60596 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Xrcc1Q60596 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Xrcc1Q60596 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Xrcc1Q60596 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Xrcc1Q60596 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Xrcc1Q60596 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Xrcc1Q60596 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.87■□□□□ 0.45
Xrcc1Q60596 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Xrcc1Q60596 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Xrcc1Q60596 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Xrcc1Q60596 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.87■□□□□ 0.45
Xrcc1Q60596 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.87■□□□□ 0.45
Xrcc1Q60596 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Xrcc1Q60596 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Xrcc1Q60596 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Xrcc1Q60596 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Xrcc1Q60596 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Xrcc1Q60596 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Xrcc1Q60596 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.86■□□□□ 0.45
Xrcc1Q60596 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.86■□□□□ 0.45
Xrcc1Q60596 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.86■□□□□ 0.45
Xrcc1Q60596 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Xrcc1Q60596 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.86■□□□□ 0.45
Xrcc1Q60596 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Xrcc1Q60596 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Xrcc1Q60596 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Xrcc1Q60596 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Xrcc1Q60596 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Xrcc1Q60596 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Xrcc1Q60596 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.85■□□□□ 0.45
Xrcc1Q60596 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Xrcc1Q60596 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.85■□□□□ 0.45
Xrcc1Q60596 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Xrcc1Q60596 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Xrcc1Q60596 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Xrcc1Q60596 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.85■□□□□ 0.45
Xrcc1Q60596 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Xrcc1Q60596 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Xrcc1Q60596 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Xrcc1Q60596 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Xrcc1Q60596 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Xrcc1Q60596 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Xrcc1Q60596 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Xrcc1Q60596 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Xrcc1Q60596 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Xrcc1Q60596 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Xrcc1Q60596 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Xrcc1Q60596 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Xrcc1Q60596 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Xrcc1Q60596 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Xrcc1Q60596 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Xrcc1Q60596 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.84■□□□□ 0.45
Xrcc1Q60596 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Xrcc1Q60596 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Xrcc1Q60596 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Xrcc1Q60596 Gm6365-201ENSMUST00000054711 744 ntBASIC17.84■□□□□ 0.45
Xrcc1Q60596 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Xrcc1Q60596 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Xrcc1Q60596 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Xrcc1Q60596 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms