Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav2Q5R1I9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav2Q5R1I9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav2Q5R1I9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav2Q5R1I9 Gm45640-201ENSMUST00000210665 1896 ntBASIC14.92□□□□□ -0.02
Trav2Q5R1I9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav2Q5R1I9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav2Q5R1I9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav2Q5R1I9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav2Q5R1I9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav2Q5R1I9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav2Q5R1I9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav2Q5R1I9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav2Q5R1I9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav2Q5R1I9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav2Q5R1I9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav2Q5R1I9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav2Q5R1I9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav2Q5R1I9 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.91□□□□□ -0.02
Trav2Q5R1I9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav2Q5R1I9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav2Q5R1I9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav2Q5R1I9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Trav2Q5R1I9 Gm13148-201ENSMUST00000118892 745 ntBASIC14.91□□□□□ -0.02
Trav2Q5R1I9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.91□□□□□ -0.02
Trav2Q5R1I9 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.91□□□□□ -0.02
Trav2Q5R1I9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trav2Q5R1I9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav2Q5R1I9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Trav2Q5R1I9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trav2Q5R1I9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav2Q5R1I9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav2Q5R1I9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav2Q5R1I9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav2Q5R1I9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav2Q5R1I9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav2Q5R1I9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav2Q5R1I9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav2Q5R1I9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Trav2Q5R1I9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav2Q5R1I9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Trav2Q5R1I9 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.9□□□□□ -0.02
Trav2Q5R1I9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav2Q5R1I9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav2Q5R1I9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav2Q5R1I9 Gm4968-201ENSMUST00000071458 858 ntBASIC14.9□□□□□ -0.02
Trav2Q5R1I9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav2Q5R1I9 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.9□□□□□ -0.02
Trav2Q5R1I9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav2Q5R1I9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav2Q5R1I9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav2Q5R1I9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav2Q5R1I9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav2Q5R1I9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav2Q5R1I9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav2Q5R1I9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav2Q5R1I9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav2Q5R1I9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav2Q5R1I9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav2Q5R1I9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav2Q5R1I9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav2Q5R1I9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav2Q5R1I9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Trav2Q5R1I9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav2Q5R1I9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav2Q5R1I9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav2Q5R1I9 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.89□□□□□ -0.03
Trav2Q5R1I9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav2Q5R1I9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav2Q5R1I9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav2Q5R1I9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav2Q5R1I9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav2Q5R1I9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav2Q5R1I9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav2Q5R1I9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav2Q5R1I9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav2Q5R1I9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.88□□□□□ -0.03
Trav2Q5R1I9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav2Q5R1I9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav2Q5R1I9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav2Q5R1I9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav2Q5R1I9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav2Q5R1I9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav2Q5R1I9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav2Q5R1I9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav2Q5R1I9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav2Q5R1I9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav2Q5R1I9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav2Q5R1I9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav2Q5R1I9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav2Q5R1I9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav2Q5R1I9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav2Q5R1I9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav2Q5R1I9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav2Q5R1I9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav2Q5R1I9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav2Q5R1I9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav2Q5R1I9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Trav2Q5R1I9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav2Q5R1I9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms