Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-1Q5R1I8 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-1Q5R1I8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-1Q5R1I8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-1Q5R1I8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-1Q5R1I8 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-1Q5R1I8 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-1Q5R1I8 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-1Q5R1I8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-1Q5R1I8 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav3-1Q5R1I8 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-1Q5R1I8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-1Q5R1I8 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-1Q5R1I8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-1Q5R1I8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC12.78□□□□□ -0.36
Trav3-1Q5R1I8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-1Q5R1I8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav3-1Q5R1I8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-1Q5R1I8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-1Q5R1I8 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-1Q5R1I8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav3-1Q5R1I8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav3-1Q5R1I8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
Trav3-1Q5R1I8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav3-1Q5R1I8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav3-1Q5R1I8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav3-1Q5R1I8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav3-1Q5R1I8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav3-1Q5R1I8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-1Q5R1I8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav3-1Q5R1I8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-1Q5R1I8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-1Q5R1I8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-1Q5R1I8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-1Q5R1I8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-1Q5R1I8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-1Q5R1I8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav3-1Q5R1I8 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-1Q5R1I8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-1Q5R1I8 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-1Q5R1I8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-1Q5R1I8 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-1Q5R1I8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav3-1Q5R1I8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-1Q5R1I8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-1Q5R1I8 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-1Q5R1I8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-1Q5R1I8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-1Q5R1I8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-1Q5R1I8 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav3-1Q5R1I8 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-1Q5R1I8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-1Q5R1I8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-1Q5R1I8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-1Q5R1I8 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-1Q5R1I8 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-1Q5R1I8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC12.76□□□□□ -0.37
Trav3-1Q5R1I8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-1Q5R1I8 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav3-1Q5R1I8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-1Q5R1I8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-1Q5R1I8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-1Q5R1I8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav3-1Q5R1I8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav3-1Q5R1I8 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-1Q5R1I8 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-1Q5R1I8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-1Q5R1I8 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav3-1Q5R1I8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-1Q5R1I8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-1Q5R1I8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC12.75□□□□□ -0.37
Trav3-1Q5R1I8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav3-1Q5R1I8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-1Q5R1I8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-1Q5R1I8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-1Q5R1I8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-1Q5R1I8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-1Q5R1I8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav3-1Q5R1I8 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-1Q5R1I8 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-1Q5R1I8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-1Q5R1I8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav3-1Q5R1I8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-1Q5R1I8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-1Q5R1I8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-1Q5R1I8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-1Q5R1I8 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-1Q5R1I8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-1Q5R1I8 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-1Q5R1I8 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-1Q5R1I8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav3-1Q5R1I8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-1Q5R1I8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-1Q5R1I8 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-1Q5R1I8 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Trav3-1Q5R1I8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-1Q5R1I8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-1Q5R1I8 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-1Q5R1I8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3-1Q5R1I8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms