Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6d-4Q5R1I0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav6d-4Q5R1I0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6d-4Q5R1I0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6d-4Q5R1I0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6d-4Q5R1I0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6d-4Q5R1I0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav6d-4Q5R1I0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6d-4Q5R1I0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Trav6d-4Q5R1I0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6d-4Q5R1I0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Trav6d-4Q5R1I0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trav6d-4Q5R1I0 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.75■□□□□ 0.11
Trav6d-4Q5R1I0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6d-4Q5R1I0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6d-4Q5R1I0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6d-4Q5R1I0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.75■□□□□ 0.11
Trav6d-4Q5R1I0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6d-4Q5R1I0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6d-4Q5R1I0 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.74■□□□□ 0.11
Trav6d-4Q5R1I0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trav6d-4Q5R1I0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trav6d-4Q5R1I0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6d-4Q5R1I0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.74■□□□□ 0.11
Trav6d-4Q5R1I0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.74■□□□□ 0.11
Trav6d-4Q5R1I0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6d-4Q5R1I0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6d-4Q5R1I0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6d-4Q5R1I0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6d-4Q5R1I0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6d-4Q5R1I0 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6d-4Q5R1I0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6d-4Q5R1I0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6d-4Q5R1I0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6d-4Q5R1I0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6d-4Q5R1I0 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.73■□□□□ 0.11
Trav6d-4Q5R1I0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6d-4Q5R1I0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6d-4Q5R1I0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6d-4Q5R1I0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Trav6d-4Q5R1I0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6d-4Q5R1I0 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.73■□□□□ 0.11
Trav6d-4Q5R1I0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6d-4Q5R1I0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6d-4Q5R1I0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6d-4Q5R1I0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav6d-4Q5R1I0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6d-4Q5R1I0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6d-4Q5R1I0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6d-4Q5R1I0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6d-4Q5R1I0 Gm5408-201ENSMUST00000197998 747 ntBASIC15.72■□□□□ 0.11
Trav6d-4Q5R1I0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav6d-4Q5R1I0 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Trav6d-4Q5R1I0 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.72■□□□□ 0.11
Trav6d-4Q5R1I0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6d-4Q5R1I0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6d-4Q5R1I0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav6d-4Q5R1I0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6d-4Q5R1I0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6d-4Q5R1I0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6d-4Q5R1I0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Trav6d-4Q5R1I0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6d-4Q5R1I0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6d-4Q5R1I0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6d-4Q5R1I0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6d-4Q5R1I0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.71■□□□□ 0.11
Trav6d-4Q5R1I0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.71■□□□□ 0.11
Trav6d-4Q5R1I0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6d-4Q5R1I0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6d-4Q5R1I0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6d-4Q5R1I0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6d-4Q5R1I0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6d-4Q5R1I0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6d-4Q5R1I0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6d-4Q5R1I0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.71■□□□□ 0.11
Trav6d-4Q5R1I0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6d-4Q5R1I0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6d-4Q5R1I0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav6d-4Q5R1I0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav6d-4Q5R1I0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6d-4Q5R1I0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trav6d-4Q5R1I0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6d-4Q5R1I0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6d-4Q5R1I0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Trav6d-4Q5R1I0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6d-4Q5R1I0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6d-4Q5R1I0 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.7■□□□□ 0.1
Trav6d-4Q5R1I0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6d-4Q5R1I0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6d-4Q5R1I0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-4Q5R1I0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-4Q5R1I0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-4Q5R1I0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-4Q5R1I0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-4Q5R1I0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-4Q5R1I0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-4Q5R1I0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-4Q5R1I0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-4Q5R1I0 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-4Q5R1I0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms