Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.59□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Gm8770-201ENSMUST00000121113 1109 ntBASIC14.59□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.59□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Serp2-204ENSMUST00000228055 705 ntBASIC14.58□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Gm7417-201ENSMUST00000192950 473 ntBASIC14.57□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.56□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.56□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms