Protein–RNA interactions for Protein: Q5ND28

Scarf1, Scavenger receptor class F member 1, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarf1Q5ND28 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scarf1Q5ND28 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scarf1Q5ND28 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.58■□□□□ 0.88
Scarf1Q5ND28 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scarf1Q5ND28 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scarf1Q5ND28 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scarf1Q5ND28 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scarf1Q5ND28 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scarf1Q5ND28 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scarf1Q5ND28 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.57■□□□□ 0.88
Scarf1Q5ND28 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scarf1Q5ND28 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scarf1Q5ND28 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.57■□□□□ 0.88
Scarf1Q5ND28 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scarf1Q5ND28 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scarf1Q5ND28 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scarf1Q5ND28 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Scarf1Q5ND28 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scarf1Q5ND28 Gm13148-201ENSMUST00000118892 745 ntBASIC20.56■□□□□ 0.88
Scarf1Q5ND28 Gm12933-201ENSMUST00000120203 872 ntBASIC20.56■□□□□ 0.88
Scarf1Q5ND28 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.56■□□□□ 0.88
Scarf1Q5ND28 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scarf1Q5ND28 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scarf1Q5ND28 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scarf1Q5ND28 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.56■□□□□ 0.88
Scarf1Q5ND28 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scarf1Q5ND28 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Scarf1Q5ND28 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scarf1Q5ND28 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scarf1Q5ND28 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scarf1Q5ND28 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scarf1Q5ND28 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scarf1Q5ND28 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scarf1Q5ND28 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Scarf1Q5ND28 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Scarf1Q5ND28 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scarf1Q5ND28 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Scarf1Q5ND28 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scarf1Q5ND28 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scarf1Q5ND28 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Scarf1Q5ND28 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scarf1Q5ND28 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Scarf1Q5ND28 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Scarf1Q5ND28 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Scarf1Q5ND28 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scarf1Q5ND28 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scarf1Q5ND28 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scarf1Q5ND28 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scarf1Q5ND28 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scarf1Q5ND28 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scarf1Q5ND28 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scarf1Q5ND28 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scarf1Q5ND28 Golph3-205ENSMUST00000228671 2842 ntBASIC20.53■□□□□ 0.88
Scarf1Q5ND28 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.53■□□□□ 0.88
Scarf1Q5ND28 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scarf1Q5ND28 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scarf1Q5ND28 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scarf1Q5ND28 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scarf1Q5ND28 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scarf1Q5ND28 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scarf1Q5ND28 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scarf1Q5ND28 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.52■□□□□ 0.88
Scarf1Q5ND28 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Scarf1Q5ND28 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.52■□□□□ 0.88
Scarf1Q5ND28 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC20.52■□□□□ 0.88
Scarf1Q5ND28 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Scarf1Q5ND28 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.52■□□□□ 0.88
Scarf1Q5ND28 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Scarf1Q5ND28 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scarf1Q5ND28 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scarf1Q5ND28 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Scarf1Q5ND28 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.51■□□□□ 0.87
Scarf1Q5ND28 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scarf1Q5ND28 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Scarf1Q5ND28 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scarf1Q5ND28 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Scarf1Q5ND28 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scarf1Q5ND28 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Scarf1Q5ND28 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Scarf1Q5ND28 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Scarf1Q5ND28 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scarf1Q5ND28 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scarf1Q5ND28 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scarf1Q5ND28 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Scarf1Q5ND28 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scarf1Q5ND28 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scarf1Q5ND28 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scarf1Q5ND28 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.5■□□□□ 0.87
Scarf1Q5ND28 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scarf1Q5ND28 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scarf1Q5ND28 Gm7290-201ENSMUST00000104990 617 ntBASIC20.5■□□□□ 0.87
Scarf1Q5ND28 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scarf1Q5ND28 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scarf1Q5ND28 Gm12918-201ENSMUST00000120234 636 ntBASIC20.5■□□□□ 0.87
Scarf1Q5ND28 Gm15710-201ENSMUST00000121821 636 ntBASIC20.5■□□□□ 0.87
Scarf1Q5ND28 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
Scarf1Q5ND28 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Scarf1Q5ND28 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scarf1Q5ND28 Mir5133-201ENSMUST00000174955 77 ntBASIC20.5■□□□□ 0.87
Scarf1Q5ND28 Gm5075-201ENSMUST00000196916 622 ntBASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms