Protein–RNA interactions for Protein: Q5KU39

Vps41, Vacuolar protein sorting-associated protein 41 homolog, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps41Q5KU39 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps41Q5KU39 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps41Q5KU39 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vps41Q5KU39 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Vps41Q5KU39 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps41Q5KU39 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vps41Q5KU39 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps41Q5KU39 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps41Q5KU39 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.52■□□□□ 0.72
Vps41Q5KU39 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vps41Q5KU39 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.52■□□□□ 0.71
Vps41Q5KU39 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vps41Q5KU39 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vps41Q5KU39 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vps41Q5KU39 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vps41Q5KU39 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vps41Q5KU39 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Vps41Q5KU39 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps41Q5KU39 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps41Q5KU39 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.51■□□□□ 0.71
Vps41Q5KU39 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps41Q5KU39 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps41Q5KU39 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps41Q5KU39 Gm12922-201ENSMUST00000120626 809 ntBASIC19.51■□□□□ 0.71
Vps41Q5KU39 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.51■□□□□ 0.71
Vps41Q5KU39 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps41Q5KU39 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.51■□□□□ 0.71
Vps41Q5KU39 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Vps41Q5KU39 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps41Q5KU39 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.5■□□□□ 0.71
Vps41Q5KU39 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps41Q5KU39 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps41Q5KU39 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps41Q5KU39 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps41Q5KU39 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.5■□□□□ 0.71
Vps41Q5KU39 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Vps41Q5KU39 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Vps41Q5KU39 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps41Q5KU39 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.5■□□□□ 0.71
Vps41Q5KU39 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps41Q5KU39 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps41Q5KU39 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps41Q5KU39 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps41Q5KU39 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Vps41Q5KU39 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Vps41Q5KU39 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Vps41Q5KU39 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps41Q5KU39 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.49■□□□□ 0.71
Vps41Q5KU39 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.49■□□□□ 0.71
Vps41Q5KU39 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Vps41Q5KU39 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vps41Q5KU39 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps41Q5KU39 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.49■□□□□ 0.71
Vps41Q5KU39 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps41Q5KU39 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.48■□□□□ 0.71
Vps41Q5KU39 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps41Q5KU39 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Vps41Q5KU39 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vps41Q5KU39 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vps41Q5KU39 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Vps41Q5KU39 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps41Q5KU39 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Vps41Q5KU39 Grk6-206ENSMUST00000224995 2971 ntBASIC19.48■□□□□ 0.71
Vps41Q5KU39 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Vps41Q5KU39 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.48■□□□□ 0.71
Vps41Q5KU39 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vps41Q5KU39 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps41Q5KU39 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps41Q5KU39 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Vps41Q5KU39 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps41Q5KU39 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Vps41Q5KU39 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps41Q5KU39 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps41Q5KU39 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vps41Q5KU39 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps41Q5KU39 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps41Q5KU39 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps41Q5KU39 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
Vps41Q5KU39 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Vps41Q5KU39 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
Vps41Q5KU39 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps41Q5KU39 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps41Q5KU39 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps41Q5KU39 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps41Q5KU39 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
Vps41Q5KU39 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps41Q5KU39 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.47■□□□□ 0.71
Vps41Q5KU39 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Vps41Q5KU39 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps41Q5KU39 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps41Q5KU39 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps41Q5KU39 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.46■□□□□ 0.71
Vps41Q5KU39 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps41Q5KU39 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.46■□□□□ 0.71
Vps41Q5KU39 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.46■□□□□ 0.71
Vps41Q5KU39 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps41Q5KU39 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps41Q5KU39 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps41Q5KU39 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps41Q5KU39 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms