Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps13aQ5H8C4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps13aQ5H8C4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vps13aQ5H8C4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps13aQ5H8C4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Vps13aQ5H8C4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps13aQ5H8C4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps13aQ5H8C4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Vps13aQ5H8C4 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps13aQ5H8C4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps13aQ5H8C4 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps13aQ5H8C4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Vps13aQ5H8C4 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps13aQ5H8C4 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.81■□□□□ 0.6
Vps13aQ5H8C4 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps13aQ5H8C4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps13aQ5H8C4 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.81■□□□□ 0.6
Vps13aQ5H8C4 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps13aQ5H8C4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Vps13aQ5H8C4 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vps13aQ5H8C4 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Vps13aQ5H8C4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps13aQ5H8C4 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vps13aQ5H8C4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vps13aQ5H8C4 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vps13aQ5H8C4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps13aQ5H8C4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vps13aQ5H8C4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps13aQ5H8C4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vps13aQ5H8C4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vps13aQ5H8C4 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps13aQ5H8C4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps13aQ5H8C4 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.8■□□□□ 0.6
Vps13aQ5H8C4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps13aQ5H8C4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps13aQ5H8C4 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Vps13aQ5H8C4 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Vps13aQ5H8C4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Vps13aQ5H8C4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps13aQ5H8C4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps13aQ5H8C4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vps13aQ5H8C4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps13aQ5H8C4 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps13aQ5H8C4 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps13aQ5H8C4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vps13aQ5H8C4 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Vps13aQ5H8C4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps13aQ5H8C4 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps13aQ5H8C4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vps13aQ5H8C4 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.78■□□□□ 0.6
Vps13aQ5H8C4 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps13aQ5H8C4 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vps13aQ5H8C4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps13aQ5H8C4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps13aQ5H8C4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vps13aQ5H8C4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.78■□□□□ 0.6
Vps13aQ5H8C4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps13aQ5H8C4 AA414768-201ENSMUST00000121924 1257 ntBASIC18.78■□□□□ 0.6
Vps13aQ5H8C4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps13aQ5H8C4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps13aQ5H8C4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps13aQ5H8C4 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Vps13aQ5H8C4 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps13aQ5H8C4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps13aQ5H8C4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vps13aQ5H8C4 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps13aQ5H8C4 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Vps13aQ5H8C4 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps13aQ5H8C4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vps13aQ5H8C4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vps13aQ5H8C4 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.77■□□□□ 0.59
Vps13aQ5H8C4 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.77■□□□□ 0.59
Vps13aQ5H8C4 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps13aQ5H8C4 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.76■□□□□ 0.59
Vps13aQ5H8C4 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.76■□□□□ 0.59
Vps13aQ5H8C4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps13aQ5H8C4 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vps13aQ5H8C4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vps13aQ5H8C4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vps13aQ5H8C4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps13aQ5H8C4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vps13aQ5H8C4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps13aQ5H8C4 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps13aQ5H8C4 Gm7284-201ENSMUST00000131667 944 ntBASIC18.75■□□□□ 0.59
Vps13aQ5H8C4 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.75■□□□□ 0.59
Vps13aQ5H8C4 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Vps13aQ5H8C4 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps13aQ5H8C4 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.75■□□□□ 0.59
Vps13aQ5H8C4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps13aQ5H8C4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps13aQ5H8C4 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps13aQ5H8C4 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vps13aQ5H8C4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps13aQ5H8C4 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vps13aQ5H8C4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Vps13aQ5H8C4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps13aQ5H8C4 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.74■□□□□ 0.59
Vps13aQ5H8C4 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps13aQ5H8C4 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps13aQ5H8C4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms