Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Rnf20Q5DTM8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC22.33■■□□□ 1.17
Rnf20Q5DTM8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Rnf20Q5DTM8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rnf20Q5DTM8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Rnf20Q5DTM8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Rnf20Q5DTM8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Rnf20Q5DTM8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Rnf20Q5DTM8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rnf20Q5DTM8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Rnf20Q5DTM8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rnf20Q5DTM8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rnf20Q5DTM8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC22.32■■□□□ 1.16
Rnf20Q5DTM8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC22.32■■□□□ 1.16
Rnf20Q5DTM8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC22.32■■□□□ 1.16
Rnf20Q5DTM8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rnf20Q5DTM8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Rnf20Q5DTM8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rnf20Q5DTM8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC22.32■■□□□ 1.16
Rnf20Q5DTM8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rnf20Q5DTM8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rnf20Q5DTM8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC22.32■■□□□ 1.16
Rnf20Q5DTM8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rnf20Q5DTM8 Reep4-203ENSMUST00000226563 1444 ntBASIC22.31■■□□□ 1.16
Rnf20Q5DTM8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rnf20Q5DTM8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rnf20Q5DTM8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rnf20Q5DTM8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rnf20Q5DTM8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rnf20Q5DTM8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rnf20Q5DTM8 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rnf20Q5DTM8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC22.31■■□□□ 1.16
Rnf20Q5DTM8 Gm10129-202ENSMUST00000193100 1316 ntBASIC22.31■■□□□ 1.16
Rnf20Q5DTM8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rnf20Q5DTM8 Gm9885-202ENSMUST00000186234 2209 ntBASIC22.3■■□□□ 1.16
Rnf20Q5DTM8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rnf20Q5DTM8 CT010467.1-202ENSMUST00000205406 714 ntBASIC22.3■■□□□ 1.16
Rnf20Q5DTM8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rnf20Q5DTM8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Rnf20Q5DTM8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Rnf20Q5DTM8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rnf20Q5DTM8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC22.3■■□□□ 1.16
Rnf20Q5DTM8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rnf20Q5DTM8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rnf20Q5DTM8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Rnf20Q5DTM8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rnf20Q5DTM8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rnf20Q5DTM8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rnf20Q5DTM8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Rnf20Q5DTM8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Rnf20Q5DTM8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC22.29■■□□□ 1.16
Rnf20Q5DTM8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC22.29■■□□□ 1.16
Rnf20Q5DTM8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rnf20Q5DTM8 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC22.29■■□□□ 1.16
Rnf20Q5DTM8 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rnf20Q5DTM8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf20Q5DTM8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf20Q5DTM8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC22.28■■□□□ 1.16
Rnf20Q5DTM8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf20Q5DTM8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf20Q5DTM8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf20Q5DTM8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf20Q5DTM8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf20Q5DTM8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf20Q5DTM8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf20Q5DTM8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf20Q5DTM8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf20Q5DTM8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf20Q5DTM8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf20Q5DTM8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf20Q5DTM8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf20Q5DTM8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC22.27■■□□□ 1.16
Rnf20Q5DTM8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf20Q5DTM8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf20Q5DTM8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC22.27■■□□□ 1.16
Rnf20Q5DTM8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf20Q5DTM8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf20Q5DTM8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf20Q5DTM8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf20Q5DTM8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf20Q5DTM8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Rnf20Q5DTM8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.15
Rnf20Q5DTM8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnf20Q5DTM8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnf20Q5DTM8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnf20Q5DTM8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnf20Q5DTM8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnf20Q5DTM8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnf20Q5DTM8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC22.26■■□□□ 1.15
Rnf20Q5DTM8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnf20Q5DTM8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Rnf20Q5DTM8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC22.26■■□□□ 1.15
Rnf20Q5DTM8 Gm13146-201ENSMUST00000118508 780 ntBASIC22.26■■□□□ 1.15
Rnf20Q5DTM8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC22.26■■□□□ 1.15
Rnf20Q5DTM8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
Rnf20Q5DTM8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Rnf20Q5DTM8 Gm10493-201ENSMUST00000097270 612 ntBASIC22.26■■□□□ 1.15
Rnf20Q5DTM8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnf20Q5DTM8 Gm6627-201ENSMUST00000218299 2386 ntBASIC22.26■■□□□ 1.15
Rnf20Q5DTM8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms