Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC33.21■■■□□ 2.91
Pds5bQ4VA53 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Pds5bQ4VA53 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Pds5bQ4VA53 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Pds5bQ4VA53 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC33.2■■■□□ 2.91
Pds5bQ4VA53 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
Pds5bQ4VA53 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Pds5bQ4VA53 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Pds5bQ4VA53 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
Pds5bQ4VA53 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Pds5bQ4VA53 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC33.2■■■□□ 2.9
Pds5bQ4VA53 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC33.2■■■□□ 2.9
Pds5bQ4VA53 Gm7461-201ENSMUST00000058918 827 ntBASIC33.19■■■□□ 2.9
Pds5bQ4VA53 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC33.19■■■□□ 2.9
Pds5bQ4VA53 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
Pds5bQ4VA53 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
Pds5bQ4VA53 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Pds5bQ4VA53 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC33.19■■■□□ 2.9
Pds5bQ4VA53 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Pds5bQ4VA53 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC33.18■■■□□ 2.9
Pds5bQ4VA53 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC33.18■■■□□ 2.9
Pds5bQ4VA53 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
Pds5bQ4VA53 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Pds5bQ4VA53 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Pds5bQ4VA53 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Pds5bQ4VA53 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC33.18■■■□□ 2.9
Pds5bQ4VA53 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC33.18■■■□□ 2.9
Pds5bQ4VA53 Gm25925-201ENSMUST00000158314 306 ntBASIC33.18■■■□□ 2.9
Pds5bQ4VA53 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC33.18■■■□□ 2.9
Pds5bQ4VA53 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC33.18■■■□□ 2.9
Pds5bQ4VA53 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
Pds5bQ4VA53 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Pds5bQ4VA53 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Pds5bQ4VA53 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC33.17■■■□□ 2.9
Pds5bQ4VA53 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Pds5bQ4VA53 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC33.17■■■□□ 2.9
Pds5bQ4VA53 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC33.17■■■□□ 2.9
Pds5bQ4VA53 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Pds5bQ4VA53 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Pds5bQ4VA53 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC33.16■■■□□ 2.9
Pds5bQ4VA53 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Pds5bQ4VA53 Gm7284-201ENSMUST00000131667 944 ntBASIC33.15■■■□□ 2.9
Pds5bQ4VA53 AC134329.2-201ENSMUST00000217897 428 ntBASIC33.15■■■□□ 2.9
Pds5bQ4VA53 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC33.15■■■□□ 2.9
Pds5bQ4VA53 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Pds5bQ4VA53 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
Pds5bQ4VA53 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC33.14■■■□□ 2.9
Pds5bQ4VA53 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC33.14■■■□□ 2.9
Pds5bQ4VA53 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC33.14■■■□□ 2.9
Pds5bQ4VA53 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
Pds5bQ4VA53 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC33.14■■■□□ 2.89
Pds5bQ4VA53 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC33.13■■■□□ 2.89
Pds5bQ4VA53 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Pds5bQ4VA53 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Pds5bQ4VA53 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Pds5bQ4VA53 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Pds5bQ4VA53 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Pds5bQ4VA53 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC33.13■■■□□ 2.89
Pds5bQ4VA53 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Pds5bQ4VA53 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Pds5bQ4VA53 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Pds5bQ4VA53 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC33.12■■■□□ 2.89
Pds5bQ4VA53 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Pds5bQ4VA53 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Pds5bQ4VA53 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Pds5bQ4VA53 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC33.11■■■□□ 2.89
Pds5bQ4VA53 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Pds5bQ4VA53 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC33.11■■■□□ 2.89
Pds5bQ4VA53 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC33.11■■■□□ 2.89
Pds5bQ4VA53 Gm17661-201ENSMUST00000170317 270 ntBASIC33.11■■■□□ 2.89
Pds5bQ4VA53 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
Pds5bQ4VA53 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Pds5bQ4VA53 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC33.11■■■□□ 2.89
Pds5bQ4VA53 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC33.1■■■□□ 2.89
Pds5bQ4VA53 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC33.1■■■□□ 2.89
Pds5bQ4VA53 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Pds5bQ4VA53 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
Pds5bQ4VA53 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Pds5bQ4VA53 Gm44771-201ENSMUST00000206975 626 ntBASIC33.1■■■□□ 2.89
Pds5bQ4VA53 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
Pds5bQ4VA53 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Pds5bQ4VA53 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Pds5bQ4VA53 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC33.08■■■□□ 2.89
Pds5bQ4VA53 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Pds5bQ4VA53 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC33.08■■■□□ 2.89
Pds5bQ4VA53 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC33.08■■■□□ 2.89
Pds5bQ4VA53 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Pds5bQ4VA53 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Pds5bQ4VA53 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Pds5bQ4VA53 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
Pds5bQ4VA53 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC33.06■■■□□ 2.88
Pds5bQ4VA53 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Pds5bQ4VA53 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Pds5bQ4VA53 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
Pds5bQ4VA53 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Pds5bQ4VA53 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC33.05■■■□□ 2.88
Pds5bQ4VA53 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
Pds5bQ4VA53 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Pds5bQ4VA53 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
Pds5bQ4VA53 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC33.05■■■□□ 2.88
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms