Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Prpf38aQ4FK66 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.95■■□□□ 1.1
Prpf38aQ4FK66 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Prpf38aQ4FK66 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Prpf38aQ4FK66 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Prpf38aQ4FK66 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Prpf38aQ4FK66 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Prpf38aQ4FK66 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf38aQ4FK66 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf38aQ4FK66 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Prpf38aQ4FK66 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf38aQ4FK66 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf38aQ4FK66 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.94■■□□□ 1.1
Prpf38aQ4FK66 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.94■■□□□ 1.1
Prpf38aQ4FK66 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.94■■□□□ 1.1
Prpf38aQ4FK66 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf38aQ4FK66 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf38aQ4FK66 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Prpf38aQ4FK66 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.94■■□□□ 1.1
Prpf38aQ4FK66 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf38aQ4FK66 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.94■■□□□ 1.1
Prpf38aQ4FK66 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf38aQ4FK66 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Prpf38aQ4FK66 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Prpf38aQ4FK66 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Prpf38aQ4FK66 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Prpf38aQ4FK66 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
Prpf38aQ4FK66 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.93■■□□□ 1.1
Prpf38aQ4FK66 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.93■■□□□ 1.1
Prpf38aQ4FK66 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Prpf38aQ4FK66 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Prpf38aQ4FK66 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Prpf38aQ4FK66 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Prpf38aQ4FK66 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Prpf38aQ4FK66 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Prpf38aQ4FK66 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Prpf38aQ4FK66 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Prpf38aQ4FK66 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Prpf38aQ4FK66 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.92■■□□□ 1.1
Prpf38aQ4FK66 Gm37856-201ENSMUST00000191634 999 ntBASIC21.92■■□□□ 1.1
Prpf38aQ4FK66 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Prpf38aQ4FK66 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
Prpf38aQ4FK66 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.92■■□□□ 1.1
Prpf38aQ4FK66 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf38aQ4FK66 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf38aQ4FK66 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf38aQ4FK66 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.91■■□□□ 1.1
Prpf38aQ4FK66 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Prpf38aQ4FK66 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Prpf38aQ4FK66 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf38aQ4FK66 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.91■■□□□ 1.1
Prpf38aQ4FK66 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf38aQ4FK66 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf38aQ4FK66 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf38aQ4FK66 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf38aQ4FK66 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
Prpf38aQ4FK66 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf38aQ4FK66 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf38aQ4FK66 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf38aQ4FK66 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Prpf38aQ4FK66 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf38aQ4FK66 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.9■■□□□ 1.1
Prpf38aQ4FK66 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Prpf38aQ4FK66 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf38aQ4FK66 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.9■■□□□ 1.1
Prpf38aQ4FK66 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.9■■□□□ 1.1
Prpf38aQ4FK66 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf38aQ4FK66 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf38aQ4FK66 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf38aQ4FK66 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf38aQ4FK66 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
Prpf38aQ4FK66 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.89■■□□□ 1.1
Prpf38aQ4FK66 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Prpf38aQ4FK66 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Prpf38aQ4FK66 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Prpf38aQ4FK66 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Prpf38aQ4FK66 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Prpf38aQ4FK66 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Prpf38aQ4FK66 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Prpf38aQ4FK66 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Prpf38aQ4FK66 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf38aQ4FK66 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.88■■□□□ 1.09
Prpf38aQ4FK66 Gm8520-201ENSMUST00000186517 868 ntBASIC21.88■■□□□ 1.09
Prpf38aQ4FK66 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf38aQ4FK66 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf38aQ4FK66 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Prpf38aQ4FK66 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Prpf38aQ4FK66 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf38aQ4FK66 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf38aQ4FK66 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf38aQ4FK66 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf38aQ4FK66 Gm22240-201ENSMUST00000175225 82 ntBASIC21.87■■□□□ 1.09
Prpf38aQ4FK66 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.87■■□□□ 1.09
Prpf38aQ4FK66 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.87■■□□□ 1.09
Prpf38aQ4FK66 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf38aQ4FK66 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf38aQ4FK66 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf38aQ4FK66 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf38aQ4FK66 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Prpf38aQ4FK66 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms