Protein–RNA interactions for Protein: Q3V3V9

Carmil2, Capping protein, Arp2/3 and myosin-I linker protein 2, mousemouse

Predictions only

Length 1,296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil2Q3V3V9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.93■□□□□ 0.94
Carmil2Q3V3V9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Carmil2Q3V3V9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
Carmil2Q3V3V9 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.93■□□□□ 0.94
Carmil2Q3V3V9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
Carmil2Q3V3V9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Carmil2Q3V3V9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.93■□□□□ 0.94
Carmil2Q3V3V9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Carmil2Q3V3V9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
Carmil2Q3V3V9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.92■□□□□ 0.94
Carmil2Q3V3V9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Carmil2Q3V3V9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Carmil2Q3V3V9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Carmil2Q3V3V9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Carmil2Q3V3V9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Carmil2Q3V3V9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Carmil2Q3V3V9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Carmil2Q3V3V9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.92■□□□□ 0.94
Carmil2Q3V3V9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Carmil2Q3V3V9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Carmil2Q3V3V9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Carmil2Q3V3V9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Carmil2Q3V3V9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Carmil2Q3V3V9 Gm20049-201ENSMUST00000219950 730 ntBASIC20.91■□□□□ 0.94
Carmil2Q3V3V9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Carmil2Q3V3V9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.91■□□□□ 0.94
Carmil2Q3V3V9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Carmil2Q3V3V9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Carmil2Q3V3V9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Carmil2Q3V3V9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Carmil2Q3V3V9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.9■□□□□ 0.94
Carmil2Q3V3V9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Carmil2Q3V3V9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.9■□□□□ 0.94
Carmil2Q3V3V9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.9■□□□□ 0.94
Carmil2Q3V3V9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Carmil2Q3V3V9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Carmil2Q3V3V9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Carmil2Q3V3V9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.89■□□□□ 0.93
Carmil2Q3V3V9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.89■□□□□ 0.93
Carmil2Q3V3V9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Carmil2Q3V3V9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Carmil2Q3V3V9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Carmil2Q3V3V9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Carmil2Q3V3V9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Carmil2Q3V3V9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
Carmil2Q3V3V9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Carmil2Q3V3V9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Carmil2Q3V3V9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Carmil2Q3V3V9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Carmil2Q3V3V9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Carmil2Q3V3V9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Carmil2Q3V3V9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Carmil2Q3V3V9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Carmil2Q3V3V9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Carmil2Q3V3V9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Carmil2Q3V3V9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Carmil2Q3V3V9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Carmil2Q3V3V9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Carmil2Q3V3V9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Carmil2Q3V3V9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Carmil2Q3V3V9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Carmil2Q3V3V9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Carmil2Q3V3V9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Carmil2Q3V3V9 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.87■□□□□ 0.93
Carmil2Q3V3V9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Carmil2Q3V3V9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Carmil2Q3V3V9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Carmil2Q3V3V9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Carmil2Q3V3V9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Carmil2Q3V3V9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Carmil2Q3V3V9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Carmil2Q3V3V9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.87■□□□□ 0.93
Carmil2Q3V3V9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Carmil2Q3V3V9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Carmil2Q3V3V9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Carmil2Q3V3V9 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.87■□□□□ 0.93
Carmil2Q3V3V9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Carmil2Q3V3V9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
Carmil2Q3V3V9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Carmil2Q3V3V9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Carmil2Q3V3V9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Carmil2Q3V3V9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Carmil2Q3V3V9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Carmil2Q3V3V9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Carmil2Q3V3V9 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.86■□□□□ 0.93
Carmil2Q3V3V9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Carmil2Q3V3V9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Carmil2Q3V3V9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Carmil2Q3V3V9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Carmil2Q3V3V9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Carmil2Q3V3V9 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.86■□□□□ 0.93
Carmil2Q3V3V9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Carmil2Q3V3V9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Carmil2Q3V3V9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Carmil2Q3V3V9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Carmil2Q3V3V9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Carmil2Q3V3V9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Carmil2Q3V3V9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Carmil2Q3V3V9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Carmil2Q3V3V9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms