Protein–RNA interactions for Protein: Q3UQI9

Mindy4, Probable ubiquitin carboxyl-terminal hydrolase MINDY-4, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4Q3UQI9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mindy4Q3UQI9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mindy4Q3UQI9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Mindy4Q3UQI9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mindy4Q3UQI9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.71■□□□□ 0.91
Mindy4Q3UQI9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mindy4Q3UQI9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mindy4Q3UQI9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mindy4Q3UQI9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mindy4Q3UQI9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mindy4Q3UQI9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mindy4Q3UQI9 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.7■□□□□ 0.9
Mindy4Q3UQI9 Gm43530-201ENSMUST00000195920 274 ntBASIC20.7■□□□□ 0.9
Mindy4Q3UQI9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mindy4Q3UQI9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mindy4Q3UQI9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Mindy4Q3UQI9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Mindy4Q3UQI9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Mindy4Q3UQI9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mindy4Q3UQI9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Mindy4Q3UQI9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mindy4Q3UQI9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Mindy4Q3UQI9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mindy4Q3UQI9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mindy4Q3UQI9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mindy4Q3UQI9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mindy4Q3UQI9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.69■□□□□ 0.9
Mindy4Q3UQI9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mindy4Q3UQI9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mindy4Q3UQI9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mindy4Q3UQI9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mindy4Q3UQI9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mindy4Q3UQI9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mindy4Q3UQI9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Mindy4Q3UQI9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mindy4Q3UQI9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mindy4Q3UQI9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mindy4Q3UQI9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mindy4Q3UQI9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mindy4Q3UQI9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mindy4Q3UQI9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mindy4Q3UQI9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mindy4Q3UQI9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mindy4Q3UQI9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.67■□□□□ 0.9
Mindy4Q3UQI9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Mindy4Q3UQI9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Mindy4Q3UQI9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mindy4Q3UQI9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.67■□□□□ 0.9
Mindy4Q3UQI9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mindy4Q3UQI9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mindy4Q3UQI9 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.67■□□□□ 0.9
Mindy4Q3UQI9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mindy4Q3UQI9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Mindy4Q3UQI9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mindy4Q3UQI9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mindy4Q3UQI9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mindy4Q3UQI9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Mindy4Q3UQI9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mindy4Q3UQI9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Mindy4Q3UQI9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mindy4Q3UQI9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mindy4Q3UQI9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mindy4Q3UQI9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Mindy4Q3UQI9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Mindy4Q3UQI9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mindy4Q3UQI9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mindy4Q3UQI9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Mindy4Q3UQI9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mindy4Q3UQI9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mindy4Q3UQI9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.64■□□□□ 0.9
Mindy4Q3UQI9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Mindy4Q3UQI9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Mindy4Q3UQI9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Mindy4Q3UQI9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Mindy4Q3UQI9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Mindy4Q3UQI9 Gm10399-202ENSMUST00000202768 748 ntBASIC20.64■□□□□ 0.89
Mindy4Q3UQI9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mindy4Q3UQI9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mindy4Q3UQI9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Mindy4Q3UQI9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.63■□□□□ 0.89
Mindy4Q3UQI9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mindy4Q3UQI9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.63■□□□□ 0.89
Mindy4Q3UQI9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Mindy4Q3UQI9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mindy4Q3UQI9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mindy4Q3UQI9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mindy4Q3UQI9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mindy4Q3UQI9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mindy4Q3UQI9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Mindy4Q3UQI9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mindy4Q3UQI9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mindy4Q3UQI9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mindy4Q3UQI9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Mindy4Q3UQI9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Mindy4Q3UQI9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Mindy4Q3UQI9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Mindy4Q3UQI9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.62■□□□□ 0.89
Mindy4Q3UQI9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mindy4Q3UQI9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Mindy4Q3UQI9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms