Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Shisa3Q3UPR0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Shisa3Q3UPR0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shisa3Q3UPR0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shisa3Q3UPR0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Shisa3Q3UPR0 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.16■□□□□ 0.18
Shisa3Q3UPR0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shisa3Q3UPR0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Shisa3Q3UPR0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shisa3Q3UPR0 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shisa3Q3UPR0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Shisa3Q3UPR0 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.16■□□□□ 0.18
Shisa3Q3UPR0 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shisa3Q3UPR0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shisa3Q3UPR0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.16■□□□□ 0.18
Shisa3Q3UPR0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shisa3Q3UPR0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shisa3Q3UPR0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shisa3Q3UPR0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shisa3Q3UPR0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Shisa3Q3UPR0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shisa3Q3UPR0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Shisa3Q3UPR0 Fst-202ENSMUST00000223640 2612 ntBASIC16.15■□□□□ 0.18
Shisa3Q3UPR0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shisa3Q3UPR0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shisa3Q3UPR0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shisa3Q3UPR0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Shisa3Q3UPR0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.15■□□□□ 0.18
Shisa3Q3UPR0 Gm12821-201ENSMUST00000120022 600 ntBASIC16.15■□□□□ 0.18
Shisa3Q3UPR0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shisa3Q3UPR0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shisa3Q3UPR0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shisa3Q3UPR0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shisa3Q3UPR0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shisa3Q3UPR0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Shisa3Q3UPR0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Shisa3Q3UPR0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shisa3Q3UPR0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Shisa3Q3UPR0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa3Q3UPR0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa3Q3UPR0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa3Q3UPR0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa3Q3UPR0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa3Q3UPR0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa3Q3UPR0 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.14■□□□□ 0.17
Shisa3Q3UPR0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa3Q3UPR0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa3Q3UPR0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa3Q3UPR0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa3Q3UPR0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Shisa3Q3UPR0 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa3Q3UPR0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa3Q3UPR0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa3Q3UPR0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.14■□□□□ 0.17
Shisa3Q3UPR0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa3Q3UPR0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa3Q3UPR0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shisa3Q3UPR0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shisa3Q3UPR0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.13■□□□□ 0.17
Shisa3Q3UPR0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Shisa3Q3UPR0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shisa3Q3UPR0 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Shisa3Q3UPR0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.13■□□□□ 0.17
Shisa3Q3UPR0 Gm27454-201ENSMUST00000185090 204 ntBASIC16.13■□□□□ 0.17
Shisa3Q3UPR0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.13■□□□□ 0.17
Shisa3Q3UPR0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Shisa3Q3UPR0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shisa3Q3UPR0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.13■□□□□ 0.17
Shisa3Q3UPR0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shisa3Q3UPR0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shisa3Q3UPR0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shisa3Q3UPR0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shisa3Q3UPR0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Shisa3Q3UPR0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shisa3Q3UPR0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Shisa3Q3UPR0 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Shisa3Q3UPR0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.12■□□□□ 0.17
Shisa3Q3UPR0 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Shisa3Q3UPR0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Shisa3Q3UPR0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shisa3Q3UPR0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Shisa3Q3UPR0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Shisa3Q3UPR0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Shisa3Q3UPR0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shisa3Q3UPR0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shisa3Q3UPR0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Shisa3Q3UPR0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shisa3Q3UPR0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shisa3Q3UPR0 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.11■□□□□ 0.17
Shisa3Q3UPR0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Shisa3Q3UPR0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Shisa3Q3UPR0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shisa3Q3UPR0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shisa3Q3UPR0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.11■□□□□ 0.17
Shisa3Q3UPR0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.11■□□□□ 0.17
Shisa3Q3UPR0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shisa3Q3UPR0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shisa3Q3UPR0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Shisa3Q3UPR0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Shisa3Q3UPR0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms