Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp30Q3UN04 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp30Q3UN04 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp30Q3UN04 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.86■□□□□ 0.61
Usp30Q3UN04 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.86■□□□□ 0.61
Usp30Q3UN04 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp30Q3UN04 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp30Q3UN04 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Usp30Q3UN04 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp30Q3UN04 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp30Q3UN04 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.85■□□□□ 0.61
Usp30Q3UN04 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp30Q3UN04 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Usp30Q3UN04 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp30Q3UN04 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp30Q3UN04 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp30Q3UN04 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Usp30Q3UN04 Gm10812-201ENSMUST00000099864 546 ntBASIC18.85■□□□□ 0.61
Usp30Q3UN04 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp30Q3UN04 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Usp30Q3UN04 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp30Q3UN04 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp30Q3UN04 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp30Q3UN04 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp30Q3UN04 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp30Q3UN04 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.84■□□□□ 0.61
Usp30Q3UN04 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.84■□□□□ 0.61
Usp30Q3UN04 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp30Q3UN04 Gm27275-201ENSMUST00000184318 272 ntBASIC18.84■□□□□ 0.61
Usp30Q3UN04 Gm44549-201ENSMUST00000208351 577 ntBASIC18.84■□□□□ 0.61
Usp30Q3UN04 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp30Q3UN04 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp30Q3UN04 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp30Q3UN04 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp30Q3UN04 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp30Q3UN04 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp30Q3UN04 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp30Q3UN04 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp30Q3UN04 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp30Q3UN04 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp30Q3UN04 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp30Q3UN04 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.83■□□□□ 0.6
Usp30Q3UN04 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.83■□□□□ 0.6
Usp30Q3UN04 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.83■□□□□ 0.6
Usp30Q3UN04 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp30Q3UN04 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Usp30Q3UN04 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp30Q3UN04 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp30Q3UN04 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.83■□□□□ 0.6
Usp30Q3UN04 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Usp30Q3UN04 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp30Q3UN04 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Usp30Q3UN04 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp30Q3UN04 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.82■□□□□ 0.6
Usp30Q3UN04 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp30Q3UN04 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp30Q3UN04 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp30Q3UN04 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp30Q3UN04 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.82■□□□□ 0.6
Usp30Q3UN04 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp30Q3UN04 Dio3-201ENSMUST00000097228 1449 ntBASIC18.82■□□□□ 0.6
Usp30Q3UN04 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.82■□□□□ 0.6
Usp30Q3UN04 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp30Q3UN04 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp30Q3UN04 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp30Q3UN04 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp30Q3UN04 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Usp30Q3UN04 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp30Q3UN04 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp30Q3UN04 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp30Q3UN04 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp30Q3UN04 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp30Q3UN04 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp30Q3UN04 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp30Q3UN04 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp30Q3UN04 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp30Q3UN04 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp30Q3UN04 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Usp30Q3UN04 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.8■□□□□ 0.6
Usp30Q3UN04 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.8■□□□□ 0.6
Usp30Q3UN04 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.8■□□□□ 0.6
Usp30Q3UN04 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Usp30Q3UN04 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Usp30Q3UN04 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp30Q3UN04 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp30Q3UN04 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp30Q3UN04 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp30Q3UN04 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp30Q3UN04 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp30Q3UN04 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp30Q3UN04 Gm10252-201ENSMUST00000209541 832 ntBASIC18.79■□□□□ 0.6
Usp30Q3UN04 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Usp30Q3UN04 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp30Q3UN04 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp30Q3UN04 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp30Q3UN04 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp30Q3UN04 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.78■□□□□ 0.6
Usp30Q3UN04 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Usp30Q3UN04 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp30Q3UN04 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms