Protein–RNA interactions for Protein: Q3UJV1

Ccdc61, Coiled-coil domain-containing protein 61, mousemouse

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc61Q3UJV1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc61Q3UJV1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc61Q3UJV1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Ccdc61Q3UJV1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Ccdc61Q3UJV1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc61Q3UJV1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
Ccdc61Q3UJV1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc61Q3UJV1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ccdc61Q3UJV1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.46■□□□□ 0.71
Ccdc61Q3UJV1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc61Q3UJV1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc61Q3UJV1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc61Q3UJV1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ccdc61Q3UJV1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Ccdc61Q3UJV1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc61Q3UJV1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc61Q3UJV1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.46■□□□□ 0.71
Ccdc61Q3UJV1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc61Q3UJV1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc61Q3UJV1 Rab3c-203ENSMUST00000224180 967 ntBASIC19.46■□□□□ 0.71
Ccdc61Q3UJV1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc61Q3UJV1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ccdc61Q3UJV1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.46■□□□□ 0.71
Ccdc61Q3UJV1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ccdc61Q3UJV1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc61Q3UJV1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Ccdc61Q3UJV1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc61Q3UJV1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc61Q3UJV1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc61Q3UJV1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc61Q3UJV1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc61Q3UJV1 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.45■□□□□ 0.7
Ccdc61Q3UJV1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc61Q3UJV1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc61Q3UJV1 Notumos-201ENSMUST00000151998 2659 ntBASIC19.45■□□□□ 0.7
Ccdc61Q3UJV1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc61Q3UJV1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc61Q3UJV1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.45■□□□□ 0.7
Ccdc61Q3UJV1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.45■□□□□ 0.7
Ccdc61Q3UJV1 Gm26524-201ENSMUST00000192339 390 ntBASIC19.45■□□□□ 0.7
Ccdc61Q3UJV1 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.45■□□□□ 0.7
Ccdc61Q3UJV1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc61Q3UJV1 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ccdc61Q3UJV1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc61Q3UJV1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc61Q3UJV1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc61Q3UJV1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc61Q3UJV1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc61Q3UJV1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc61Q3UJV1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc61Q3UJV1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc61Q3UJV1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ccdc61Q3UJV1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc61Q3UJV1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc61Q3UJV1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc61Q3UJV1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.43■□□□□ 0.7
Ccdc61Q3UJV1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.43■□□□□ 0.7
Ccdc61Q3UJV1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc61Q3UJV1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc61Q3UJV1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc61Q3UJV1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc61Q3UJV1 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc61Q3UJV1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc61Q3UJV1 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.42■□□□□ 0.7
Ccdc61Q3UJV1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc61Q3UJV1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc61Q3UJV1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.42■□□□□ 0.7
Ccdc61Q3UJV1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.42■□□□□ 0.7
Ccdc61Q3UJV1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccdc61Q3UJV1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.42■□□□□ 0.7
Ccdc61Q3UJV1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc61Q3UJV1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc61Q3UJV1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc61Q3UJV1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc61Q3UJV1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc61Q3UJV1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc61Q3UJV1 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.41■□□□□ 0.7
Ccdc61Q3UJV1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc61Q3UJV1 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccdc61Q3UJV1 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc61Q3UJV1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc61Q3UJV1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccdc61Q3UJV1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.41■□□□□ 0.7
Ccdc61Q3UJV1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc61Q3UJV1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc61Q3UJV1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc61Q3UJV1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc61Q3UJV1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.4■□□□□ 0.7
Ccdc61Q3UJV1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc61Q3UJV1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc61Q3UJV1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.4■□□□□ 0.7
Ccdc61Q3UJV1 Gm20049-201ENSMUST00000219950 730 ntBASIC19.4■□□□□ 0.7
Ccdc61Q3UJV1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc61Q3UJV1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc61Q3UJV1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc61Q3UJV1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc61Q3UJV1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc61Q3UJV1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc61Q3UJV1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc61Q3UJV1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms