Protein–RNA interactions for Protein: Q3TX51

Lrrc28, Leucine-rich repeat-containing protein 28, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc28Q3TX51 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrrc28Q3TX51 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lrrc28Q3TX51 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.76■□□□□ 0.43
Lrrc28Q3TX51 Gm20049-201ENSMUST00000219950 730 ntBASIC17.76■□□□□ 0.43
Lrrc28Q3TX51 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrrc28Q3TX51 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrrc28Q3TX51 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrrc28Q3TX51 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrrc28Q3TX51 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrrc28Q3TX51 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrrc28Q3TX51 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Lrrc28Q3TX51 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrrc28Q3TX51 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Lrrc28Q3TX51 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.76■□□□□ 0.43
Lrrc28Q3TX51 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Lrrc28Q3TX51 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrrc28Q3TX51 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrrc28Q3TX51 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lrrc28Q3TX51 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Lrrc28Q3TX51 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrrc28Q3TX51 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrrc28Q3TX51 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Lrrc28Q3TX51 Gm20760-201ENSMUST00000179197 648 ntBASIC17.75■□□□□ 0.43
Lrrc28Q3TX51 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lrrc28Q3TX51 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.75■□□□□ 0.43
Lrrc28Q3TX51 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrrc28Q3TX51 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrrc28Q3TX51 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrrc28Q3TX51 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrrc28Q3TX51 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.75■□□□□ 0.43
Lrrc28Q3TX51 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.75■□□□□ 0.43
Lrrc28Q3TX51 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Lrrc28Q3TX51 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrrc28Q3TX51 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.74■□□□□ 0.43
Lrrc28Q3TX51 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrrc28Q3TX51 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrrc28Q3TX51 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.74■□□□□ 0.43
Lrrc28Q3TX51 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lrrc28Q3TX51 Rab3c-203ENSMUST00000224180 967 ntBASIC17.74■□□□□ 0.43
Lrrc28Q3TX51 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrrc28Q3TX51 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrrc28Q3TX51 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrrc28Q3TX51 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lrrc28Q3TX51 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lrrc28Q3TX51 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lrrc28Q3TX51 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Lrrc28Q3TX51 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrrc28Q3TX51 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrrc28Q3TX51 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrrc28Q3TX51 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Lrrc28Q3TX51 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.73■□□□□ 0.43
Lrrc28Q3TX51 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.73■□□□□ 0.43
Lrrc28Q3TX51 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrrc28Q3TX51 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrrc28Q3TX51 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrrc28Q3TX51 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrrc28Q3TX51 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Lrrc28Q3TX51 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lrrc28Q3TX51 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Lrrc28Q3TX51 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrrc28Q3TX51 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Lrrc28Q3TX51 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lrrc28Q3TX51 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.72■□□□□ 0.43
Lrrc28Q3TX51 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lrrc28Q3TX51 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrrc28Q3TX51 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrrc28Q3TX51 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrrc28Q3TX51 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrrc28Q3TX51 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Lrrc28Q3TX51 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.72■□□□□ 0.43
Lrrc28Q3TX51 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Lrrc28Q3TX51 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrrc28Q3TX51 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrrc28Q3TX51 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrrc28Q3TX51 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lrrc28Q3TX51 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Lrrc28Q3TX51 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Lrrc28Q3TX51 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lrrc28Q3TX51 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lrrc28Q3TX51 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lrrc28Q3TX51 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lrrc28Q3TX51 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.71■□□□□ 0.43
Lrrc28Q3TX51 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.71■□□□□ 0.43
Lrrc28Q3TX51 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.71■□□□□ 0.43
Lrrc28Q3TX51 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lrrc28Q3TX51 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.71■□□□□ 0.43
Lrrc28Q3TX51 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Lrrc28Q3TX51 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Lrrc28Q3TX51 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lrrc28Q3TX51 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lrrc28Q3TX51 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Lrrc28Q3TX51 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Lrrc28Q3TX51 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Lrrc28Q3TX51 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.7■□□□□ 0.42
Lrrc28Q3TX51 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.7■□□□□ 0.42
Lrrc28Q3TX51 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lrrc28Q3TX51 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lrrc28Q3TX51 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lrrc28Q3TX51 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.7■□□□□ 0.42
Lrrc28Q3TX51 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms