Protein–RNA interactions for Protein: Q0P5V2

Sobp, Sine oculis-binding protein homolog, mousemouse

Predictions only

Length 864 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SobpQ0P5V2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SobpQ0P5V2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SobpQ0P5V2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SobpQ0P5V2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
SobpQ0P5V2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SobpQ0P5V2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SobpQ0P5V2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SobpQ0P5V2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SobpQ0P5V2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SobpQ0P5V2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SobpQ0P5V2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SobpQ0P5V2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC21.61■■□□□ 1.05
SobpQ0P5V2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SobpQ0P5V2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SobpQ0P5V2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SobpQ0P5V2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SobpQ0P5V2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SobpQ0P5V2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SobpQ0P5V2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
SobpQ0P5V2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SobpQ0P5V2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SobpQ0P5V2 Gm22697-201ENSMUST00000175194 63 ntBASIC21.6■■□□□ 1.05
SobpQ0P5V2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SobpQ0P5V2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SobpQ0P5V2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SobpQ0P5V2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SobpQ0P5V2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC21.59■■□□□ 1.05
SobpQ0P5V2 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SobpQ0P5V2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC21.59■■□□□ 1.05
SobpQ0P5V2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
SobpQ0P5V2 Gm10138-203ENSMUST00000206952 366 ntBASIC21.59■■□□□ 1.05
SobpQ0P5V2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SobpQ0P5V2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SobpQ0P5V2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SobpQ0P5V2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SobpQ0P5V2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SobpQ0P5V2 Gm8258-201ENSMUST00000055593 1449 ntBASIC21.58■■□□□ 1.05
SobpQ0P5V2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SobpQ0P5V2 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
SobpQ0P5V2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
SobpQ0P5V2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SobpQ0P5V2 AC134329.2-201ENSMUST00000217897 428 ntBASIC21.58■■□□□ 1.05
SobpQ0P5V2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SobpQ0P5V2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SobpQ0P5V2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
SobpQ0P5V2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SobpQ0P5V2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.57■■□□□ 1.04
SobpQ0P5V2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SobpQ0P5V2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SobpQ0P5V2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
SobpQ0P5V2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC21.57■■□□□ 1.04
SobpQ0P5V2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SobpQ0P5V2 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC21.57■■□□□ 1.04
SobpQ0P5V2 Gm18669-201ENSMUST00000216049 778 ntBASIC21.57■■□□□ 1.04
SobpQ0P5V2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SobpQ0P5V2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SobpQ0P5V2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SobpQ0P5V2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SobpQ0P5V2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SobpQ0P5V2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SobpQ0P5V2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
SobpQ0P5V2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SobpQ0P5V2 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SobpQ0P5V2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SobpQ0P5V2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SobpQ0P5V2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SobpQ0P5V2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SobpQ0P5V2 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.56■■□□□ 1.04
SobpQ0P5V2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SobpQ0P5V2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SobpQ0P5V2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SobpQ0P5V2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SobpQ0P5V2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SobpQ0P5V2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SobpQ0P5V2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SobpQ0P5V2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SobpQ0P5V2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SobpQ0P5V2 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SobpQ0P5V2 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.55■■□□□ 1.04
SobpQ0P5V2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.55■■□□□ 1.04
SobpQ0P5V2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
SobpQ0P5V2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.54■■□□□ 1.04
SobpQ0P5V2 Gm15375-201ENSMUST00000119510 849 ntBASIC21.54■■□□□ 1.04
SobpQ0P5V2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
SobpQ0P5V2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
SobpQ0P5V2 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SobpQ0P5V2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SobpQ0P5V2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SobpQ0P5V2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
SobpQ0P5V2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SobpQ0P5V2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SobpQ0P5V2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SobpQ0P5V2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SobpQ0P5V2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SobpQ0P5V2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SobpQ0P5V2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SobpQ0P5V2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.52■■□□□ 1.04
SobpQ0P5V2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SobpQ0P5V2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SobpQ0P5V2 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms